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Q3USZ3 (Q3USZ3_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Bmp15 MGI 1316745
OrganismMus musculus (Mouse) EMBL BAE24187.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the TGF-beta family. RuleBase RU000354

Sequences

Sequence LengthMass (Da)Tools
Q3USZ3 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 3D8F71F0B93B56E5

FASTA39244,899
        10         20         30         40         50         60 
MALLTILRIL LWGVVLFMEQ RVQMAKPGWP STALLADDPT LPSILDLAKE APGKEMKQWP 

        70         80         90        100        110        120 
QGYPLRYMLK LYHRSADPHG HPRENRTIGA KMVRLVKPSA NTVRPPRGSW HVQTLDFPLA 

       130        140        150        160        170        180 
SNQVAYELIR ATVVYRHQLH LVNYHLSCHV ETWVPKCRTK HLPSSKSGSS KPSPMSKAWT 

       190        200        210        220        230        240 
EIDITHCIQQ KLWNREGRSV LRLRFMCQQQ KGNETREFRW HGMTSLDVAF LLLYFNDTDD 

       250        260        270        280        290        300 
RVQGKLLARG QEELTDRESS FLMRSVRQAC SIESDASCPS QEHDGSVNNQ CSLHPYKVSF 

       310        320        330        340        350        360 
HQLGWDHWII APRLYTPNYC KGICTRVLPY GLNSPNHAII QSLVNELVNH SVPQPSCVPY 

       370        380        390 
NFLPMSILLI ETNGSILYKE YEGMIAQSCT CR 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE24187.1.
Tissue: Egg EMBL BAE24187.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK139847 mRNA. Translation: BAE24158.1.
AK139936 mRNA. Translation: BAE24187.1.
IPIIPI00129233.
UniGeneMm.42160.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1316745. Bmp15.

Phylogenomic databases

HOVERGENHBG004660.
InParanoidQ3USZ3.

Gene expression databases

GenevestigatorQ3USZ3.

Family and domain databases

InterProIPR015923. BMP-15.
IPR002405. Inhibin_asu.
IPR001839. TGF-b_C.
IPR015615. TGF-beta-rel.
IPR017948. TGFb_CS.
[Graphical view]
PANTHERPTHR11848. PTHR11848. 1 hit.
PTHR11848:SF22. PTHR11848:SF22. 1 hit.
PfamPF00019. TGF_beta. 1 hit.
[Graphical view]
PRINTSPR00669. INHIBINA.
SMARTSM00204. TGFB. 1 hit.
[Graphical view]
PROSITEPS00250. TGF_BETA_1. 1 hit.
PS51362. TGF_BETA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ3USZ3_MOUSE
AccessionPrimary (citable) accession number: Q3USZ3
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 3, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)