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Q3URZ9

- Q3URZ9_MOUSE

UniProt

Q3URZ9 - Q3URZ9_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Cspg4

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. activation of MAPK activity Source: MGI
    2. cell proliferation Source: MGI
    3. glial cell migration Source: MGI
    4. transmembrane receptor protein tyrosine kinase signaling pathway Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Cspg4Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:2153093. Cspg4.

    Subcellular locationi

    GO - Cellular componenti

    1. plasma membrane Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriQ3URZ9.

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ3URZ9.
    KOiK08115.

    Sequencei

    Sequence statusi: Fragment.

    Q3URZ9-1 [UniParc]FASTAAdd to Basket

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    RGTDNDSGPE DLVYTIEQPS NGRIALRVAP DTEVHRFTQA QLDSGLVLFS    50
    HRGALEGGFH FDLSDGAHTS PGHFFRVVAQ KQALLSLEGT RKLTVCPESV 100
    QPLSSQSLSA SSSTGADPRH LLYRVVRGPQ LGRLLHAQQG SAEEVLVNFT 150
    QAEVNAGNIL YEHEMSSEPF WEAHDTIGLL LSSPPARDLA ATLAVMVSFD 200
    AACPQRPSRL WKNKGLWVPE GQRAKITVAA LDAANLLASV PASQRSRHDV 250
    LFQVTQFPTR GQLLVSEEPL HARRPYFLQS ELAAGQLVYA HGGGGTQQDG 300
    FRFRAHLQGP TGTSVAGPQT SEAFVITVRD VNERPPQPQA SIPLRVTRGS 350
    RAPVSRAQLS VVDPDSAPGE IEYEVQRAPH NGFLSLAGDN TGPVTHFTQA 400
    DVDAGRLAFV ANGSSVAGVF QLSMSDGASP PIPMSLAVDV LPSTIEVQLR 450
    APLEVPQALG RTSLSRQQLQ VISDREEPDV AYRLTQGPLY GQLLVGGQPA 500
    SAFSQLQVDQ GDVVFVFTNF SSSQDHFKVV ALARGVNASA TVNVTVQALL 550
    HVWAGGPWPQ GTTLRLDPTV LDASELANRT GSMPHFRLLA GPRYGRVVRV 600
    SQGRTESRSN QLVEHFTQGD LEEGQLGLEV GKPEGRSTGP AGDRLTLELW 650
    AKGVPPAVAL LDFATEPYHA AKSYSVALLS VPEAVRTETE KPGRSVPTGQ 700
    PGQAASSPVP TAAKGGFLGF LEANMFSIII PVCLILLLLA LILPLLFYLR 750
    KRNKTGKHDV QVLTAKPRNG LAGDTETFRK VEPGQAIPLI TVPGQGPPPG 800
    GQPDPELLQF CRTPNPALRN GQYWV 825
    Length:825
    Mass (Da):88,510
    Last modified:October 11, 2005 - v1
    Checksum:i93177CEABF3EB351
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK140986 mRNA. Translation: BAE24538.1.
    RefSeqiNP_620570.2. NM_139001.2.
    UniGeneiMm.41329.

    Genome annotation databases

    GeneIDi121021.
    KEGGimmu:121021.
    UCSCiuc009pto.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK140986 mRNA. Translation: BAE24538.1 .
    RefSeqi NP_620570.2. NM_139001.2.
    UniGenei Mm.41329.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 121021.
    KEGGi mmu:121021.
    UCSCi uc009pto.1. mouse.

    Organism-specific databases

    CTDi 1464.
    MGIi MGI:2153093. Cspg4.

    Phylogenomic databases

    InParanoidi Q3URZ9.
    KOi K08115.

    Miscellaneous databases

    NextBioi 369752.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3URZ9.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeadImported.

    Entry informationi

    Entry nameiQ3URZ9_MOUSE
    AccessioniPrimary (citable) accession number: Q3URZ9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)