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Protein
Submitted name:

Putative uncharacterized protein

Gene

Ralgds

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Guanine-nucleotide releasing factorSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:RalgdsImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:107485. Ralgds.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ3UQY9.

Expressioni

Gene expression databases

GenevisibleiQ3UQY9. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097812.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini57 – 182126N-terminal Ras-GEFInterPro annotationAdd
BLAST
Domaini312 – 574263Ras-GEFInterPro annotationAdd
BLAST
Domaini724 – 81188Ras-associatingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains N-terminal Ras-GEF domain.SAAS annotation
Contains Ras-GEF domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG3629. Eukaryota.
ENOG410ZUT5. LUCA.
HOVERGENiHBG005864.

Family and domain databases

Gene3Di1.10.840.10. 1 hit.
InterProiIPR000159. RA_dom.
IPR015758. RalGDS.
IPR000651. Ras-like_Gua-exchang_fac_N.
IPR019804. Ras_G-nucl-exch_fac_CS.
IPR023578. Ras_GEF_dom.
IPR001895. RASGEF_cat_dom.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR23113:SF35. PTHR23113:SF35. 3 hits.
PfamiPF00788. RA. 1 hit.
PF00617. RasGEF. 1 hit.
PF00618. RasGEF_N. 1 hit.
[Graphical view]
SMARTiSM00314. RA. 1 hit.
SM00147. RasGEF. 1 hit.
SM00229. RasGEFN. 1 hit.
[Graphical view]
SUPFAMiSSF48366. SSF48366. 2 hits.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50200. RA. 1 hit.
PS00720. RASGEF. 1 hit.
PS50009. RASGEF_CAT. 1 hit.
PS50212. RASGEF_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UQY9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMVDCQSSTQ EIGEELINGV IYSISLRKVQ LHQGATKGQR WLGCENESAL
60 70 80 90 100
NLYETCKVRT VKAGTLEKLV EHLVPAFQGS DLSYVTVFLC TYRAFTTTQQ
110 120 130 140 150
VLDLLFKRYG CILPYSSEDG GPQDQLKNAI SSILGTWLDQ YSEDFCQPPD
160 170 180 190 200
FPCLKQLVAY VQLNMPGSDL ERRAHLLLAQ LEDLEPSEAE SEALSPAPVL
210 220 230 240 250
SLKPASQLEP ALLLTPSQVV TSTPVREPAA APVPVLASSP VVAPAPELEP
260 270 280 290 300
VPEPPQEPEP SLALAPELEP AVSQSLELES APVPTPALEP SWSLPEATEN
310 320 330 340 350
GLTEKPHLLL FPPDLVAEQF TLMDAELFKK VVPYHCLGSI WSQRDKKGKE
360 370 380 390 400
HLAPTIRATV AQFNNVANCV ITTCLGDQSM KAPDRARVVE HWIEVARECR
410 420 430 440 450
ALKNFSSLYA ILSALQSNAI HRLKKTWEEV SRDSFRVFQK LSEIFSDENN
460 470 480 490 500
YSLSRELLIK EGTSKFATLE MNPRRAQRRQ KETGVIQGTV PYLGTFLTDL
510 520 530 540 550
VMLDTAMKDY LYGRLINFEK RRKEFEVIAQ IKLLQSACNN YSIAPEEHFG
560 570 580 590 600
TWFRAMERLS EAESYTLSCE LEPPSESASN TLRSKKSTAI VKRWSDRQAP
610 620 630 640 650
STELSTSSSA HSKSCDQLRC SPYLGSGDIT DALSVHSAGS SSSDVEEINM
660 670 680 690 700
SFVPESPDGQ EKKFWESASQ SSPETSGISS ASSSTSSSSA STTPVSTTRT
710 720 730 740 750
HKRSVSGVCS YSSSLPLYNQ QVGDCCIIRV SLDVDNGNMY KSILVTSQDK
760 770 780 790 800
APTVIRKAMD KHNLDEDEPE DYELVQIISE DHKLKIPENA NVFYAMNSTA
810 820 830 840
NYDFILKKRT FTKGAKVKHG ASSTLPRMKQ KGLRIAKGIF
Length:840
Mass (Da):92,920
Last modified:October 11, 2005 - v1
Checksum:iE0A0BFAB495B2A77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK141959 mRNA. Translation: BAE24899.1.
RefSeqiNP_001139306.1. NM_001145834.1.
UniGeneiMm.5236.

Genome annotation databases

GeneIDi19730.
UCSCiuc008iyn.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK141959 mRNA. Translation: BAE24899.1.
RefSeqiNP_001139306.1. NM_001145834.1.
UniGeneiMm.5236.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097812.

Proteomic databases

PaxDbiQ3UQY9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi19730.
UCSCiuc008iyn.2. mouse.

Organism-specific databases

CTDi5900.
MGIiMGI:107485. Ralgds.

Phylogenomic databases

eggNOGiKOG3629. Eukaryota.
ENOG410ZUT5. LUCA.
HOVERGENiHBG005864.

Miscellaneous databases

ChiTaRSiRalgds. mouse.
NextBioi297152.
SOURCEiSearch...

Gene expression databases

GenevisibleiQ3UQY9. MM.

Family and domain databases

Gene3Di1.10.840.10. 1 hit.
InterProiIPR000159. RA_dom.
IPR015758. RalGDS.
IPR000651. Ras-like_Gua-exchang_fac_N.
IPR019804. Ras_G-nucl-exch_fac_CS.
IPR023578. Ras_GEF_dom.
IPR001895. RASGEF_cat_dom.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR23113:SF35. PTHR23113:SF35. 3 hits.
PfamiPF00788. RA. 1 hit.
PF00617. RasGEF. 1 hit.
PF00618. RasGEF_N. 1 hit.
[Graphical view]
SMARTiSM00314. RA. 1 hit.
SM00147. RasGEF. 1 hit.
SM00229. RasGEFN. 1 hit.
[Graphical view]
SUPFAMiSSF48366. SSF48366. 2 hits.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50200. RA. 1 hit.
PS00720. RASGEF. 1 hit.
PS50009. RASGEF_CAT. 1 hit.
PS50212. RASGEF_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.

Entry informationi

Entry nameiQ3UQY9_MOUSE
AccessioniPrimary (citable) accession number: Q3UQY9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 11, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.