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Q3UPY7 (Q3UPY7_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Alg10b MGI 2146159
Synonyms:AU045404 MGI 2146159
OrganismMus musculus (Mouse) EMBL BAE25257.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length464 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue4641 EMBL BAE25257.1

Sequences

Sequence LengthMass (Da)Tools
Q3UPY7 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 2CE56E64FC468120

FASTA46454,158
        10         20         30         40         50         60 
MAQLEGYYFS AALSCTFLVS CLLFSAFSRA LREPYMDEIF HLPQAQRYCE GRFSLSQWDP 

        70         80         90        100        110        120 
MITTLPGLYL VSVGVVKPAS WLLGWSEHVI CSIGVLRFVN LLFSVGNFYL LYLLFRKVQP 

       130        140        150        160        170        180 
RNKASSSIQR ILSTLTLAVF PTLYFFNFLY YTEAGSVFFT LFAYLMCLYG NHRTSALLGF 

       190        200        210        220        230        240 
CGFMFRQTNI IWAAFCAGHL IAQKCSEAWK IELQKKKEER LAPTKGPLSE LRRVLQFLLV 

       250        260        270        280        290        300 
YAMSLKNLRM LFLLTWPYVL LLLAFFAFVV VNGGIVVGDR SSHEACLHFP QLFYFFSFTA 

       310        320        330        340        350        360 
FFSFPHLLSL TKVKTFLSLV WKRRVQFSVV TLVSILLVWK FTYVHKYLLA DNRHYTFYVW 

       370        380        390        400        410        420 
KRVFQRHEVV KYLLVPAYIF AGWAIADSLK AKSIFWNLMF FVCLVASTVP QKLLEFRYFI 

       430        440        450        460 
LPYIIYRLNI PLPPISRLVC ELGCYTVVNF VTFYIFLNKT FQWP 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[2]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[3]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[4]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[5]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[6]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[7]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.
[8]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25257.1.
Tissue: Lung EMBL BAE25257.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK143038 mRNA. Translation: BAE25257.1.
IPIIPI00381144.
UniGeneMm.17853.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ3UPY7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGroNOG09525.
GeneTreeENSGT00390000012906.
HOVERGENHBG053222.
InParanoidQ3UPY7.

Gene expression databases

ArrayExpressQ3UPY7.
BgeeQ3UPY7.
GenevestigatorQ3UPY7.

Family and domain databases

InterProIPR016900. Alpha1_2_glucosyltferase_Alg10.
IPR007006. Glycosyltransferase_ALG10.
[Graphical view]
PANTHERPTHR12989. DIE2_ALG10. 1 hit.
PfamPF04922. DIE2_ALG10. 1 hit.
[Graphical view]
PIRSFPIRSF028810. Alpha1_2_glucosyltferase_Alg10. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3UPY7_MOUSE
AccessionPrimary (citable) accession number: Q3UPY7
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 19, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)