Putative uncharacterized protein - Mus musculus (Mouse)

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Unreviewed, UniProtKB/TrEMBL Q3UPW0 (Q3UPW0_MOUSE)

Last modified January 19, 2010. Version 42. History...

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Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE25284.1

Gene names

Name:

Plcb1 MGI 97613

Organism

Mus musculus (Mouse) EMBL BAE25284.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Protein attributes

Sequence length	558 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	intracellular signaling cascade Inferred from electronic annotation. Source: InterPro learning Inferred from electronic annotation. Source: Compara memory Inferred from electronic annotation. Source: Compara oxygen and reactive oxygen species metabolic process Inferred from electronic annotation. Source: Compara phosphoinositide metabolic process Inferred from electronic annotation. Source: Compara
Cellular component	cytosol Inferred from electronic annotation. Source: Compara membrane fraction Inferred from electronic annotation. Source: Compara
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro enzyme binding Inferred from electronic annotation. Source: Compara phosphoinositide phospholipase C activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL BAE25284.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q3UPW0-1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 8334CCFD7491C7F0
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558

62,696

        10         20         30         40         50         60 
MAGAQPGVHA LQLKPVCVSD SLKKGTKFVK WDDDSTIVTP IILRTDPQGF FFYWTDQNKE 

        70         80         90        100        110        120 
TELLDLSLVK DARCGKHAKA PKDPKLRELL DVGNIGHLEQ RMITVVYGPD LVNISHLNLV 

       130        140        150        160        170        180 
AFQEEVAKEW TNEVFSLATN LLAQNMSRDA FLEKAYTKLK LQVTPEGRIP LKNIYRLFSA 

       190        200        210        220        230        240 
DRKRVETALE ACSLPSSRND SIPQEDFTPD VYRVFLNNLC PRPEIDNIFS EFGAKSKPYL 

       250        260        270        280        290        300 
TVDQMMDFIN LKQRDPRLNE ILYPPLKQEQ VQVLIEKYEP NSSLAKKGQM SVDGFMRYLS 

       310        320        330        340        350        360 
GEENGVVSPE KLDLNEDMSQ PLSHYFINSS HNTYLTAGQL AGNSSVEMYR QVLLSGCRCV 

       370        380        390        400        410        420 
ELDCWKGRTA EEEPVITHGF TMTTEISFKE VIEAIAECAF KTSPFPILLS FENHVDSPKQ 

       430        440        450        460        470        480 
QAKMAEYCRL IFGDALLMEP LEKYPLESGV PLPSPMDLMY KILVKNKKKS HKSSEGSGKK 

       490        500        510        520        530        540 
KLSEQASNTY SDSSSVFEPS SPGAGEADTE SDDDDDDDDC KKSSMDEGTA GSEAMATEEM 

       550 
SNLVNYIQPV KFESFEIP

References

[1]

"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.

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Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL BAE25284.1.
Tissue: Eyeball EMBL BAE25284.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK143153 mRNA. Translation: BAE25284.1.
IPI	IPI00928557.
RefSeq	NP_001139302.1. NP_062651.2.
UniGene	Mm.330607
3D structure databases
SMR	Q3UPW0. Positions 18-557.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3UPW0.
Genome annotation databases
Ensembl	ENSMUST00000070724; ENSMUSP00000064844; ENSMUSG00000051177; Mus musculus. [Genome view] ENSMUST00000110116; ENSMUSP00000105743; ENSMUSG00000051177; Mus musculus. [Genome view]
GeneID	18795.
KEGG	mmu:18795.
Organism-specific databases
CTD	18795.
MGI	MGI:97613. Plcb1.
Phylogenomic databases
HOVERGEN	Q3UPW0.
InParanoid	Q3UPW0.
Gene expression databases
ArrayExpress	Q3UPW0.
Bgee	Q3UPW0.
Genevestigator	Q3UPW0.
Family and domain databases
InterPro	IPR011992. EF-hand-like_dom. IPR015359. Phospholipase_C_EF-hand-like. IPR001192. Phospholipase_C_Pinositol-sp_C. IPR017946. PLC-like_Pdiesterase_TIM-brl. IPR000909. PLipase_C_PInositol-sp_X_dom. [Graphical view]
Gene3D	G3DSA:1.10.238.10. EF-Hand_type. 1 hit. G3DSA:3.20.20.190. PLC-like_Pdiesterase_TIM-brl. 1 hit.
Pfam	PF09279. efhand_like. 1 hit. PF00388. PI-PLC-X. 1 hit. [Graphical view]
PRINTS	PR00390. PHPHLIPASEC.
SMART	SM00148. PLCXc. 1 hit. [Graphical view]
PROSITE	PS50007. PIPLC_X_DOMAIN. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
SOURCE	Search...

Entry information

Entry name

Q3UPW0_MOUSE

Accession

Primary (citable) accession number: Q3UPW0

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	January 19, 2010
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information