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Q3UPI0 (Q3UPI0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Mfng MGI 1095404
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length321 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q3UPI0 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 76EBCEC2314C50CD

FASTA32136,200
        10         20         30         40         50         60 
MHCRLFRGMA GALFTLLCVG LLSLRYHSSL SQRMIQGALR LNQRNPGPLE LQLGDIFIAV 

        70         80         90        100        110        120 
KTTWAFHRSR LDLLLDTWVS RIRQQTFIFT DSPDERLQER LGPHLVVTNC SAEHSHPALS 

       130        140        150        160        170        180 
CKMAAEFDAF LVSGLRWFCH VDDDNYVNPK ALLQLLKTFP QDRDVYVGKP SLNRPIHASE 

       190        200        210        220        230        240 
LQSKNRTKLV RFWFATGGAG FCINRQLALK MVPWASGSHF VDTSALIRLP DDCTVGYIIE 

       250        260        270        280        290        300 
CKLGGRLQPS PLFHSHLETL QLLGAAQLPE QVTLSYGVFE GKLNVIKLPG PFSHEEDPSR 

       310        320 
FRSLHCLLYP DTPWCPLLAA P 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE25415.1.
Tissue: Whole body EMBL BAE25415.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK143523 mRNA. Translation: BAE25415.1.
RefSeqNP_032621.1. NM_008595.2.
UniGeneMm.149235.

3D structure databases

ProteinModelPortalQ3UPI0.
SMRQ3UPI0. Positions 50-318.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGT31. Glycosyltransferase Family 31.

Proteomic databases

PRIDEQ3UPI0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID17305.
KEGGmmu:17305.

Organism-specific databases

CTD4242.
MGIMGI:1095404. Mfng.

Phylogenomic databases

GeneTreeENSGT00390000009913.
HOVERGENHBG007986.
InParanoidQ3UPI0.
KOK05948.
OMALRWFCHV.
PhylomeDBQ3UPI0.

Gene expression databases

ArrayExpressQ3UPI0.
GenevestigatorQ3UPI0.

Family and domain databases

InterProIPR017374. Fringe.
IPR003378. Fringe-like.
[Graphical view]
PfamPF02434. Fringe. 1 hit.
[Graphical view]
PIRSFPIRSF038073. B-acetylgalactosaminyltfrase. 1 hit.
ProtoNetSearch...

Other

NextBio291848.
SOURCESearch...

Entry information

Entry nameQ3UPI0_MOUSE
AccessionPrimary (citable) accession number: Q3UPI0
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)