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Protein
Submitted name:

RISC-loading complex subunit TARBP2

Gene

Tarbp2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RISC-loading complex subunit TARBP2Imported
Gene namesi
Name:Tarbp2Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:103027. Tarbp2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000023051.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000023813.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini67 – 13569DRBM (double-stranded RNA-binding)InterPro annotationAdd
BLAST
Domaini201 – 26969DRBM (double-stranded RNA-binding)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3732. Eukaryota.
ENOG410XSCK. LUCA.
GeneTreeiENSGT00830000128290.
HOGENOMiHOG000231919.
HOVERGENiHBG001700.
KOiK18420.

Family and domain databases

Gene3Di3.30.160.20. 2 hits.
InterProiIPR014720. dsRBD_dom.
IPR028605. TRBP2.
[Graphical view]
PANTHERiPTHR10910:SF61. PTHR10910:SF61. 1 hit.
PfamiPF00035. dsrm. 1 hit.
[Graphical view]
SMARTiSM00358. DSRM. 2 hits.
[Graphical view]
PROSITEiPS50137. DS_RBD. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UNH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEEDQGSGT TTGCGLPSSF SLLDSSPPED TPVVAAEAAA PVPSAVLTRS
60 70 80 90 100
PPMEMQPPVS PQQSECNPVG ALQELVVQKG WRLPEYMVTQ ESGPAHRKEF
110 120 130 140 150
TMTCRVERFI EIGSGTSKKL AKRNAAAKML LRVHTVPLDA RDGNEAEPDD
160 170 180 190 200
DHFSIGVSSR LDGLRNRGPG CTWDSLRNSV GEKILSLRSC SVGSLGALGS
210 220 230 240 250
ACCSVLSELS EEQAFHVSYL DIEELSLSGL CQCLVELSTQ PATVCYGSAT
260 270
TREAARGDAA HRALQYLRIM AGSK
Length:274
Mass (Da):29,198
Last modified:October 11, 2005 - v1
Checksum:i386541E4B5218707
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137156 Genomic DNA. No translation available.
AK144205 mRNA. Translation: BAE25768.1.
RefSeqiNP_001240724.1. NM_001253795.1.
NP_033345.2. NM_009319.3.
UniGeneiMm.291485.

Genome annotation databases

EnsembliENSMUST00000100168; ENSMUSP00000097744; ENSMUSG00000023051.
GeneIDi21357.
KEGGimmu:21357.
UCSCiuc007xwh.3. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137156 Genomic DNA. No translation available.
AK144205 mRNA. Translation: BAE25768.1.
RefSeqiNP_001240724.1. NM_001253795.1.
NP_033345.2. NM_009319.3.
UniGeneiMm.291485.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000023813.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000100168; ENSMUSP00000097744; ENSMUSG00000023051.
GeneIDi21357.
KEGGimmu:21357.
UCSCiuc007xwh.3. mouse.

Organism-specific databases

CTDi6895.
MGIiMGI:103027. Tarbp2.

Phylogenomic databases

eggNOGiKOG3732. Eukaryota.
ENOG410XSCK. LUCA.
GeneTreeiENSGT00830000128290.
HOGENOMiHOG000231919.
HOVERGENiHBG001700.
KOiK18420.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000023051.

Family and domain databases

Gene3Di3.30.160.20. 2 hits.
InterProiIPR014720. dsRBD_dom.
IPR028605. TRBP2.
[Graphical view]
PANTHERiPTHR10910:SF61. PTHR10910:SF61. 1 hit.
PfamiPF00035. dsrm. 1 hit.
[Graphical view]
SMARTiSM00358. DSRM. 2 hits.
[Graphical view]
PROSITEiPS50137. DS_RBD. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3UNH9_MOUSE
AccessioniPrimary (citable) accession number: Q3UNH9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.