Q3UN35 (Q3UN35_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE25913.1

Gene names

Name:	B4galnt1 MGI 1342057
Synonyms:	Galgt1 MGI 1342057

Organism

Mus musculus (Mouse) EMBL BAE25913.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	ganglioside biosynthetic process Inferred from mutant phenotype. Source: MGI lipid glycosylation Inferred from electronic annotation. Source: InterPro lipid storage Inferred from genetic interaction. Source: MGI spermatogenesis Inferred from mutant phenotype. Source: MGI
Cellular component	integral to Golgi membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3UN35 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 6A15D81D2A68A28F	FASTA	533	59,212
	10 20 30 40 50 60 MRLDRRALYA LVLLLACASL GLLYSSTRNA PSLPNPLALW SPPQGPPRLD LLDLAPEPRY 70 80 90 100 110 120 AHIPVRIKEQ VVGLLAQNNC SCESKGGSLP LPFLRQVRAV DLTKAFDAEE LRAVSVAREQ 130 140 150 160 170 180 EYQAFLARSR SLADQLLIAP ANSPLQYPLQ GVEVQPLRSI LVPGLSLQEA SVQEIYQVNL 190 200 210 220 230 240 SASLGTWDVA GEVTGVTLTG EGQPDLTLAS PVLDKLNRQL QLVTYSSRSY QANTADTVRF 250 260 270 280 290 300 STKGHEVAFT ILVRHPPNPR LYPPSSLPQG AEYNISALVT IATKTFLRYD RLRTLIASIR 310 320 330 340 350 360 RFYPTVTIVI ADDSDKPERI SDPHVEHYFM PFGKGWFAGR NLAVSQVTTK YVLWVDDDFV 370 380 390 400 410 420 FTARTRLEKL VDVLEKTPLD LVGGAVREIS GYATTYRQLL SVEPGAPGLG NCFRQKQGFH 430 440 450 460 470 480 HELVGFPSCV VTDGVVNFFL ARTDKVRQVG FDPRLNRVAH LEFFLDGLGF LRVGSCSDVV 490 500 510 520 530 VDHASKVKLP WTAKDPGAET YARYRYPGSL DQSQVAKHRL LFFKHRLQCM TAE

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[2]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[3]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[4]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[5]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[6]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[7]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
[8]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6 EMBL BAE25913.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK144484 mRNA. Translation: BAE25913.1.
IPI	IPI00122592.
RefSeq	NP_001231546.1. NM_001244617.1. NP_032106.1. NM_008080.5. NP_082015.2. NM_027739.2.
UniGene	Mm.386762.
3D structure databases
ProteinModelPortal	Q3UN35.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3UN35.
Protein family/group databases
CAZy	GT12. Glycosyltransferase Family 12.
Proteomic databases
PRIDE	Q3UN35.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	14421.
KEGG	mmu:14421.
UCSC	uc007hic.1. mouse.
Organism-specific databases
CTD	2583.
MGI	MGI:1342057. B4galnt1.
Phylogenomic databases
HOVERGEN	HBG004812.
InParanoid	Q3UN35.
OMA	ITSIRRF.
PhylomeDB	Q3UN35.
Gene expression databases
ArrayExpress	Q3UN35.
Bgee	Q3UN35.
Genevestigator	Q3UN35.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR011143. GM2_synthase. [Graphical view]
KO	K00725.
Pfam	PF00535. Glycos_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF000474. GM2_GD2_synthase. 1 hit.
ProtoNet	Search...
Other
NextBio	286013.
SOURCE	Search...

Entry information

Entry name

Q3UN35_MOUSE

Accession

Primary (citable) accession number: Q3UN35

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)