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Protein
Submitted name:

Plasminogen activator inhibitor 1 RNA-binding protein

Gene

Serbp1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Plasminogen activator inhibitor 1 RNA-binding proteinImported
Gene namesi
Name:Serbp1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:1914120. Serbp1.

PTM / Processingi

Proteomic databases

PaxDbiQ3UMP4.

Expressioni

Gene expression databases

BgeeiENSMUSG00000036371.
GenevisibleiQ3UMP4. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000039110.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini189 – 307119HABP4_PAI-RBP1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2945. Eukaryota.
ENOG410YBHR. LUCA.
GeneTreeiENSGT00520000055591.
HOVERGENiHBG056357.

Family and domain databases

InterProiIPR006861. HABP4_PAIRBP1-bd.
IPR032381. IHABP4_N.
IPR027205. SERBP1.
[Graphical view]
PANTHERiPTHR12299:SF29. PTHR12299:SF29. 1 hit.
PfamiPF04774. HABP4_PAI-RBP1. 1 hit.
PF16174. IHABP4_N. 1 hit.
[Graphical view]
SMARTiSM01233. HABP4_PAI-RBP1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UMP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGHLQEGFG CVVTNRFDQL FDDESDPFEV LKAAENKKKE AGGGGVGGPG
60 70 80 90 100
AKSAAQAAAQ TNSNAAGKQL RKESQKDRKN PLPPSVGVAD KKEETQPPVA
110 120 130 140 150
LKKEGIRRVG RRPDQQLQGD GKLIDRRAER RPPRERRFEK PLEEKGEGGE
160 170 180 190 200
FSVDRPIIER PIRGRGGLGR GRGGRGRGMG RGDGFDSRGK REFDRHSGSD
210 220 230 240 250
RSGLKHEDKR GGSGSHNWGT VKDELTESPK YIQKQISYNC SDLDQSNVTE
260 270 280 290 300
ETPEGEEHPV ADTENKENEV EEVKEEGPKE MTLDEWKAIQ NKDRAKVEFN
310 320 330 340 350
IRKPNEGADG QWKKGFVLHK SKSEEAHAED SVMDHHFRKP ANDITSQLEI
360 370 380 390 400
NFGDLGRPGR GGRGGRGGRG RGGRPNRGSR TDKSSASAPD VDDPEAFPAL

A
Length:401
Mass (Da):44,005
Last modified:October 11, 2005 - v1
Checksum:iE18E8B9F6036D654
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122296 Genomic DNA. No translation available.
AC130822 Genomic DNA. No translation available.
AK144764 mRNA. Translation: BAE26054.1.
RefSeqiNP_001107036.1. NM_001113564.1.
UniGeneiMm.240490.
Mm.440861.

Genome annotation databases

EnsembliENSMUST00000203436; ENSMUSP00000144713; ENSMUSG00000036371.
GeneIDi66870.
UCSCiuc009cfk.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122296 Genomic DNA. No translation available.
AC130822 Genomic DNA. No translation available.
AK144764 mRNA. Translation: BAE26054.1.
RefSeqiNP_001107036.1. NM_001113564.1.
UniGeneiMm.240490.
Mm.440861.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000039110.

Proteomic databases

PaxDbiQ3UMP4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000203436; ENSMUSP00000144713; ENSMUSG00000036371.
GeneIDi66870.
UCSCiuc009cfk.2. mouse.

Organism-specific databases

CTDi26135.
MGIiMGI:1914120. Serbp1.

Phylogenomic databases

eggNOGiKOG2945. Eukaryota.
ENOG410YBHR. LUCA.
GeneTreeiENSGT00520000055591.
HOVERGENiHBG056357.

Miscellaneous databases

ChiTaRSiSerbp1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000036371.
GenevisibleiQ3UMP4. MM.

Family and domain databases

InterProiIPR006861. HABP4_PAIRBP1-bd.
IPR032381. IHABP4_N.
IPR027205. SERBP1.
[Graphical view]
PANTHERiPTHR12299:SF29. PTHR12299:SF29. 1 hit.
PfamiPF04774. HABP4_PAI-RBP1. 1 hit.
PF16174. IHABP4_N. 1 hit.
[Graphical view]
SMARTiSM01233. HABP4_PAI-RBP1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3UMP4_MOUSE
AccessioniPrimary (citable) accession number: Q3UMP4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.