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Protein
Submitted name:

General transcription factor IIB

Gene

Gtf2b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri11 – 42TFIIB-typePROSITE-ProRule annotationAdd BLAST32

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
General transcription factor IIBImported
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Gtf2bImported
ORF Names:mCG_7492Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2385191. Gtf2b.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiQ3ULN2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000028271.
ExpressionAtlasiQ3ULN2. baseline and differential.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiQ3ULN2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 42TFIIB-typeInterPro annotationAdd BLAST32

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri11 – 42TFIIB-typePROSITE-ProRule annotationAdd BLAST32

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1597. Eukaryota.
COG1405. LUCA.
HOVERGENiHBG017914.
KOiK03124.
OMAiNDDQGND.
OrthoDBiEOG091G0E7S.

Family and domain databases

Gene3Di1.10.472.10. 2 hits.
InterProiView protein in InterPro
IPR013763. Cyclin-like.
IPR000812. TFIIB.
IPR023486. TFIIB_CS.
IPR013150. TFIIB_cyclin.
IPR013137. Znf_TFIIB.
PANTHERiPTHR11618. PTHR11618. 1 hit.
PfamiView protein in Pfam
PF08271. TF_Zn_Ribbon. 1 hit.
PF00382. TFIIB. 2 hits.
PRINTSiPR00685. TIFACTORIIB.
SMARTiView protein in SMART
SM00385. CYCLIN. 2 hits.
SUPFAMiSSF47954. SSF47954. 2 hits.
PROSITEiView protein in PROSITE
PS00782. TFIIB. 2 hits.
PS51134. ZF_TFIIB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3ULN2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTSRLDAL PRVTCPNHPD AILVEDYRAG DMICPECGLV VGDRVIDVGS
60 70 80 90 100
EWRTFSNDKA TKDPSRVGDS QNPLLSDGDL STMIGKGTGA ASFDEFGNSK
110 120 130 140 150
YQNRRTMSSS DRAMMNAFKE ITTMADRINL PRNIVDRTNN LFKQVYEQKS
160 170 180 190 200
LKGRANDAIA SACLYIACRQ EGVPRTFKEI CAVSRISKKE IGRCFKLILK
210 220 230 240 250
ALETSVDLIT TGDFMSRFCS NLCLPKQVQM AATHIARKAV ELDLVPGRSP
260 270 280 290 300
ISVAAAAIYM ASQASAEKRT QKEIGDIAGV ADVTIRQSYR LIYPRAPDLF
310
PSDFKFDTPV DKLPQL
Length:316
Mass (Da):34,819
Last modified:October 11, 2005 - v1
Checksum:i9CC7E102526C21F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK133097 mRNA. Translation: BAE21509.1.
AK145403 mRNA. Translation: BAE26416.1.
AK146223 mRNA. Translation: BAE26991.1.
AK146666 mRNA. Translation: BAE27344.1.
AK146910 mRNA. Translation: BAE27522.1.
AK151577 mRNA. Translation: BAE30517.1.
CH466532 Genomic DNA. Translation: EDL12044.1.
RefSeqiNP_663521.1. NM_145546.1.
UniGeneiMm.271756.

Genome annotation databases

GeneIDi229906.
KEGGimmu:229906.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ3ULN2_MOUSE
AccessioniPrimary (citable) accession number: Q3ULN2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 5, 2017
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)