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Protein
Submitted name:

Aryl hydrocarbon receptor nuclear translocator

Gene

Arnt

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Aryl hydrocarbon receptor nuclear translocatorImported
Gene namesi
Name:ArntImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:88071. Arnt.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099810.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 12754BHLH (basic helix-loop-helix)InterPro annotationAdd
BLAST
Domaini146 – 22075PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini353 – 40452PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 basic helix-loop-helix (bHLH) domain.UniRule annotation
Contains PAC (PAS-associated C-terminal) domain.SAAS annotation
Contains PAS (PER-ARNT-SIM) domains.SAAS annotation
Contains bHLH (basic helix-loop-helix) domain.SAAS annotation

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410IQ5T. Eukaryota.
ENOG410XVHF. LUCA.
GeneTreeiENSGT00760000118788.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.
KOiK09097.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3ULM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATTANPEM TSDVPSLGPT IASGNPGPGI QGGGAVVQRA IKRRSGLDFD
60 70 80 90 100
DEVEVNTKFL RCDDDQMCND KERFARENHS EIERRRRNKM TAYITELSDM
110 120 130 140 150
VPTCSALARK PDKLTILRMA VSHMKSLRGT GNTSTDGSYK PSFLTDQELK
160 170 180 190 200
HLILEAADGF LFIVSCETGR VVYVSDSVTP VLNQPQSEWF GSTLYDQVHP
210 220 230 240 250
DDVDKLREQL STSENALTGR VLDLKTGTVK KEGQQSSMRM CMGSRRSFIC
260 270 280 290 300
RMRCGTSSVD PVSMNRLSFL RNRCRNGLGS VKEGEPHFVV VHCTGYIKAW
310 320 330 340 350
PPAGVSLPDD DPEAGQGSKF CLVAIGRLQV TSSPNCTDMS NICQPTEFIS
360 370 380 390 400
RHNIEGIFTF VDHRCVATVG YQPQELLGKN IVEFCHPEDQ QLLRDSFQQV
410 420 430 440 450
VKLKGQVLSV MFRFRSKTRE WLWMRTSSFT FQNPYSDEIE YIICTNTNVK
460 470 480 490 500
NSSQEPRPTL SNTIPRSQLG PTANLSLEMG TGQLPSRQQQ QQHTELDMVP
510 520 530 540 550
GRDGLASYNH SQVSVQPVAS AGSEHSKPLE KSEGLFAQDR DPRFPEIYPS
560 570 580 590 600
ITADQSKGIS SSTVPATQQL FSQGSSFPPN PRPAENFRNS GLTPPVTIVQ
610 620 630 640 650
PSSSAGQILA QISRHSNPAQ GSAPTWTSSS RPGFAAQQVP TQATAKTRSS
660 670 680 690 700
QFGVNNFQTS SSFSAMSLPG APTASSGTAA YPALPNRGSN FPPETGQTTG
710 720 730 740 750
QFQARTAEGV GVWPQWQGQQ PHHRSSSSEQ HVQQTQAQAP SQPEVFQEML
760 770
SMLGDQSNTY NNEEFPDLTM FPPFSE
Length:776
Mass (Da):85,274
Last modified:October 11, 2005 - v1
Checksum:i5C6608480699320C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092202 Genomic DNA. No translation available.
AC092203 Genomic DNA. No translation available.
AK145415 mRNA. Translation: BAE26426.1.
RefSeqiNP_001032826.1. NM_001037737.2.
NP_033839.2. NM_009709.4.
UniGeneiMm.250265.

Genome annotation databases

EnsembliENSMUST00000090804; ENSMUSP00000088313; ENSMUSG00000015522.
GeneIDi11863.
KEGGimmu:11863.
UCSCiuc008qju.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092202 Genomic DNA. No translation available.
AC092203 Genomic DNA. No translation available.
AK145415 mRNA. Translation: BAE26426.1.
RefSeqiNP_001032826.1. NM_001037737.2.
NP_033839.2. NM_009709.4.
UniGeneiMm.250265.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099810.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000090804; ENSMUSP00000088313; ENSMUSG00000015522.
GeneIDi11863.
KEGGimmu:11863.
UCSCiuc008qju.2. mouse.

Organism-specific databases

CTDi405.
MGIiMGI:88071. Arnt.

Phylogenomic databases

eggNOGiENOG410IQ5T. Eukaryota.
ENOG410XVHF. LUCA.
GeneTreeiENSGT00760000118788.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.
KOiK09097.

Miscellaneous databases

ChiTaRSiArnt. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3ULM2_MOUSE
AccessioniPrimary (citable) accession number: Q3ULM2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 6, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.