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Unreviewed, UniProtKB/TrEMBL Q3UL78 (Q3UL78_MOUSE)

Last modified January 19, 2010. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL BAE26572.1
Gene names
Name: Cdc42 MGI 106211
OrganismMus musculus (Mouse) EMBL BAE26572.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

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Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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Ontologies

Keywords
   Cellular componentMembrane Spearmint SPM003578
   LigandGTP-binding RuleBase RU003312V0 Spearmint SPM003578
Nucleotide-binding
Gene Ontology (GO)
   Biological processRho protein signal transduction

Traceable author statement. Source: MGI

adherens junction organization

Inferred from mutant phenotype. Source: MGI

cellular protein localization

Inferred from mutant phenotype. Source: MGI

establishment or maintenance of apical/basal cell polarity

Inferred from mutant phenotype. Source: MGI

filopodium assembly

Inferred from direct assay. Source: MGI

neuron fate determination

Inferred from mutant phenotype. Source: MGI

nuclear migration

Inferred from mutant phenotype. Source: MGI

positive regulation of DNA replication

Inferred from electronic annotation. Source: Compara

positive regulation of JNK cascade

Inferred from electronic annotation. Source: Compara

positive regulation of phosphoinositide 3-kinase activity

Inferred from mutant phenotype. Source: MGI

regulation of mitosis

Inferred from mutant phenotype. Source: MGI

   Cellular componentGolgi membrane

Inferred from electronic annotation. Source: Compara

apical part of cell

Inferred from direct assay. Source: MGI

cell projection

Inferred from direct assay. Source: MGI

plasma membrane

Inferred from electronic annotation. Source: Compara

secretory granule

Inferred from electronic annotation. Source: Compara

   Molecular functionGTP binding

Inferred from electronic annotation. Source: UniProtKB-KW

GTPase activity

Inferred from direct assay. Source: MGI

mitogen-activated protein kinase kinase kinase binding

Inferred from electronic annotation. Source: Compara

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q3UL78-1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: C9D158B9A0982413

FASTA14716,503
        10         20         30         40         50         60 
MIGGEPYTLG LFDTAGQEDY DRLRPLSYPQ TDVFLVCFSV VSPSSFENVK EKWVPEITHH 

        70         80         90        100        110        120 
CPKTPFLLVG TQIDLRDDPS TIEKLAKNKQ KPITPETAEK LARDLKAVKY VECSALTQKG 

       130        140 
LKNVFDEAIL AALEPPEPKK SRRCVLL

« Hide

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References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL BAE26572.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK145659 mRNA. Translation: BAE26572.1.
IPIIPI00113849.
UniGeneMm.1022
Mm.447553
Mm.475151

3D structure databases

SMRQ3UL78. Positions 1-147.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3UL78.

Genome annotation databases

EnsemblENSMUST00000051477; ENSMUSP00000054634; ENSMUSG00000006699; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:106211. Cdc42.

Phylogenomic databases

HOGENOMHBG745225.
HOVERGENQ3UL78.
InParanoidQ3UL78.

Gene expression databases

ArrayExpressQ3UL78.
BgeeQ3UL78.
GenevestigatorQ3UL78.

Family and domain databases

InterProIPR003578. GTPase_Rho.
IPR013753. Ras.
IPR005225. Small_GTP_bd.
[Graphical view]
PfamPF00071. Ras. 1 hit.
[Graphical view]
SMARTSM00174. RHO. 1 hit.
[Graphical view]
TIGRFAMsTIGR00231. small_GTP. 1 hit.
PROSITEPS51420. RHO. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

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Entry information

Entry nameQ3UL78_MOUSE
AccessionPrimary (citable) accession number: Q3UL78
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 19, 2010
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information