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Protein
Submitted name:

Putative uncharacterized protein

Gene

Nsd1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

ReactomeiREACT_278269. PKMTs methylate histone lysines.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Nsd1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1276545. Nsd1.

PTM / Processingi

Proteomic databases

PRIDEiQ3UL03.

Expressioni

Gene expression databases

BgeeiQ3UL03.
ExpressionAtlasiQ3UL03. baseline and differential.
GenevisibleiQ3UL03. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097089.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000113857.
KOiK15588.

Family and domain databases

InterProiIPR000313. PWWP_dom.
[Graphical view]
PfamiPF00855. PWWP. 1 hit.
[Graphical view]
PROSITEiPS50812. PWWP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3UL03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRTCELSRR NCLLSFSNPV NLDASEDKDS PFGNGQSNFS EPLNGCTMQL
60 70 80 90 100
PTAASGTSQN AYGQDSPSCY IPLRRLQDLA SMINVEYLSG SADGSESFQD
110 120 130 140 150
PAKSDSRAQS PIVCTSLSPG GPTALAMKQE PTCNNSPELQ LRVTKTTKNG
160 170 180 190 200
FLHFENFTGV DDADVDSEMD PEQPVTEDES IEEIFEETQT NATCNYEPKS
210 220 230 240 250
ENGVEVAMGS EQDSMPESRH GAVERPFLPL APQTEKQKNK QRSEVDGSNE
260 270 280 290 300
KTALLPAPTS LGDTNVTVEE QFNSINLSFQ DDPDSSPSPL GNMLEIPGTS
310 320 330 340 350
SPSTSQELPF CQPKKKSTPL KYEVGDLIWA KFKRRPWWPC RICSDPLINT
360 370 380 390 400
HSKMKVANRR PYREYYVEAF GDPSEKAWVA GKAIVMFEGR HQFEELPVLR
410 420 430 440 450
KRGKQKEKGY RHKVPQKILS KWEASVGLAE QYDVPKGSKN QKCVSSSVKL
460 470 480
DSEEDMPFED CTNDPDSEHL LLNGCLKSLA FDSEHSA
Length:487
Mass (Da):53,978
Last modified:October 11, 2005 - v1
Checksum:iAE0DFF2CE68E5690
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei487 – 4871Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK145783 mRNA. Translation: BAE26648.1.
RefSeqiNP_032765.3. NM_008739.3.
UniGeneiMm.12964.
Mm.168965.

Genome annotation databases

GeneIDi18193.
KEGGimmu:18193.
UCSCiuc007qqf.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK145783 mRNA. Translation: BAE26648.1.
RefSeqiNP_032765.3. NM_008739.3.
UniGeneiMm.12964.
Mm.168965.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097089.

Proteomic databases

PRIDEiQ3UL03.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18193.
KEGGimmu:18193.
UCSCiuc007qqf.1. mouse.

Organism-specific databases

CTDi64324.
MGIiMGI:1276545. Nsd1.

Phylogenomic databases

HOGENOMiHOG000113857.
KOiK15588.

Enzyme and pathway databases

ReactomeiREACT_278269. PKMTs methylate histone lysines.

Miscellaneous databases

ChiTaRSiNsd1. mouse.
NextBioi293540.
SOURCEiSearch...

Gene expression databases

BgeeiQ3UL03.
ExpressionAtlasiQ3UL03. baseline and differential.
GenevisibleiQ3UL03. MM.

Family and domain databases

InterProiIPR000313. PWWP_dom.
[Graphical view]
PfamiPF00855. PWWP. 1 hit.
[Graphical view]
PROSITEiPS50812. PWWP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3UL03_MOUSE
AccessioniPrimary (citable) accession number: Q3UL03
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 22, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.