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Q3UK15

- Q3UK15_MOUSE

UniProt

Q3UK15 - Q3UK15_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Cers5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. sphingolipid biosynthetic process Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Cers5Imported
    Synonyms:Lass5Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1919199. Cers5.

    Subcellular locationi

    GO - Cellular componenti

    1. endoplasmic reticulum Source: MGI
    2. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    Expressioni

    Gene expression databases

    ArrayExpressiQ3UK15.
    BgeeiQ3UK15.
    GenevestigatoriQ3UK15.

    Family & Domainsi

    Sequence similaritiesi

    Contains TLC (TRAM/LAG1/CLN8) domain.SAAS annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000231977.
    InParanoidiQ3UK15.

    Family and domain databases

    InterProiIPR006634. TLC-dom.
    [Graphical view]
    PfamiPF03798. TRAM_LAG1_CLN8. 1 hit.
    [Graphical view]
    SMARTiSM00724. TLC. 1 hit.
    [Graphical view]
    PROSITEiPS50922. TLC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3UK15-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFSQFIDVKR KDFLMMFIHH MIGIMLTTFS YVNNMVRVGA LIFCLHDFAD    50
    PLLEAAKMAN YARRERLCTT LFVIFGAAFI VSRLAIFPLW ILNTTLFESW 100
    EIIGPYPSWW LFNALLLILQ VLHAIWSYLI VQTASKALSR GKVSKDDRSD 150
    VESSSEEEDE TTHKNNLSGS SSSNGANCMN GYMGGSHLAE EQGTCKATGN 200
    LHFRASPHLH SCD 213
    Length:213
    Mass (Da):24,022
    Last modified:October 11, 2005 - v1
    Checksum:i74B7A2FC112DF430
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK146220 mRNA. Translation: BAE26988.1.
    UniGeneiMm.390821.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK146220 mRNA. Translation: BAE26988.1 .
    UniGenei Mm.390821.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:1919199. Cers5.

    Phylogenomic databases

    HOGENOMi HOG000231977.
    InParanoidi Q3UK15.

    Miscellaneous databases

    ChiTaRSi LASS5. mouse.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q3UK15.
    Bgeei Q3UK15.
    Genevestigatori Q3UK15.

    Family and domain databases

    InterProi IPR006634. TLC-dom.
    [Graphical view ]
    Pfami PF03798. TRAM_LAG1_CLN8. 1 hit.
    [Graphical view ]
    SMARTi SM00724. TLC. 1 hit.
    [Graphical view ]
    PROSITEi PS50922. TLC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DBA/2Imported.

    Entry informationi

    Entry nameiQ3UK15_MOUSE
    AccessioniPrimary (citable) accession number: Q3UK15
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)