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Q3UHF7

- ZEP2_MOUSE

UniProt

Q3UHF7 - ZEP2_MOUSE

Protein

Transcription factor HIVEP2

Gene

Hivep2

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    Specifically binds to the DNA sequence 5'-GGGACTTTCC-3' which is found in the enhancer elements of numerous viral promoters such as those of SV40, CMV, or HIV1. In addition, related sequences are found in the enhancer elements of a number of cellular promoters, including those of the class I MHC, interleukin-2 receptor, somatostatin receptor II, and interferon-beta genes. It may act in T-cell activation By similarity.By similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri189 – 21123C2H2-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri217 – 23923C2H2-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1783 – 180523C2H2-type 3PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1811 – 183525C2H2-type 4PROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. metal ion binding Source: MGI
    3. sequence-specific DNA binding transcription factor activity Source: MGI

    GO - Biological processi

    1. signal transduction Source: MGI
    2. transcription, DNA-templated Source: MGI

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding, Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Transcription factor HIVEP2
    Alternative name(s):
    Human immunodeficiency virus type I enhancer-binding protein 2 homolog
    Myc intron-binding protein 1
    Short name:
    MIBP-1
    Gene namesi
    Name:Hivep2
    Synonyms:Mibp1
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 10

    Organism-specific databases

    MGIiMGI:1338076. Hivep2.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell
    2. transcription factor complex Source: MGI

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 24302430Transcription factor HIVEP2PRO_0000047372Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Cross-linki2076 – 2076Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity

    Keywords - PTMi

    Isopeptide bond, Ubl conjugation

    Proteomic databases

    PaxDbiQ3UHF7.
    PRIDEiQ3UHF7.

    PTM databases

    PhosphoSiteiQ3UHF7.

    Expressioni

    Tissue specificityi

    Expressed in heart, lung, skeletal muscle and liver. In the brain expressed in cerebral cortex, hippocampus, corpora amygdala and cerebellar cortex.1 Publication

    Developmental stagei

    At E13.5 and E15.5 expressed in anterior neural tube over primordial frontal cortex, spinal cord, dorsal root glanglia and developing skeletal muscle.1 Publication

    Gene expression databases

    BgeeiQ3UHF7.
    GenevestigatoriQ3UHF7.

    Interactioni

    Subunit structurei

    Interacts with TCF4.1 Publication

    Protein-protein interaction databases

    BioGridi200314. 1 interaction.
    STRINGi10090.ENSMUSP00000015645.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3UHF7.
    SMRiQ3UHF7. Positions 188-244, 1782-1838.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati2037 – 204041
    Repeati2043 – 204642
    Repeati2055 – 205843
    Repeati2067 – 207044
    Repeati2073 – 207645
    Repeati2090 – 209346
    Repeati2096 – 209947
    Repeati2102 – 210548
    Repeati2114 – 211749
    Repeati2129 – 2132410

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni2037 – 21329610 X 4 AA tandem repeats of S-P-[RGMKC]-[RK]Add
    BLAST

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi929 – 9357Nuclear localization signalSequence Analysis

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi942 – 97433Ser-richAdd
    BLAST
    Compositional biasi1499 – 156971Ser-richAdd
    BLAST
    Compositional biasi1883 – 190725Asp/Glu-rich (acidic)Add
    BLAST
    Compositional biasi2057 – 213276Arg-richAdd
    BLAST

    Sequence similaritiesi

    Contains 4 C2H2-type zinc fingers.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri189 – 21123C2H2-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri217 – 23923C2H2-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1783 – 180523C2H2-type 3PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1811 – 183525C2H2-type 4PROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Repeat, Zinc-finger

    Phylogenomic databases

    eggNOGiNOG296349.
    GeneTreeiENSGT00530000063161.
    HOGENOMiHOG000155774.
    HOVERGENiHBG007119.
    InParanoidiQ3UHF7.
    KOiK09239.
    OMAiRKKCFLV.
    OrthoDBiEOG7V1FPQ.
    PhylomeDBiQ3UHF7.
    TreeFamiTF331837.

    Family and domain databases

    Gene3Di3.30.160.60. 4 hits.
    InterProiIPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 4 hits.
    [Graphical view]
    PROSITEiPS00028. ZINC_FINGER_C2H2_1. 4 hits.
    PS50157. ZINC_FINGER_C2H2_2. 4 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3UHF7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDTGDTALGQ KATSRSGETD SVSGRWRQEQ SAVLKMSTFS SQEGPRQPQI     50
    DPEQIGNAAS AQLFGSGKLA SPGEGLHQVT EKQYPPHRPS PYPCQHSLSF 100
    PQHSLSQGMT HSHKPHQSLE GPPWLFPGPL PSVASEDLFP FPMHGHSGGY 150
    PRKKISNLNP AYSQYSQKSI EQAEDAHKKE HKPKKPGKYI CPYCSRACAK 200
    PSVLKKHIRS HTGERPYPCI PCGFSFKTKS NLYKHRKSHA HAIKAGLVPF 250
    TESSVSKLDL EAGFIDVEAE IHSDGEQSTD TDEESSLFAE ASDKVSPGPP 300
    VPLDIASRGG YHGSLEESLG GPMKVPILII PKSGIPLASE GSQYLSSEML 350
    PNPSLNAKAD DSHTVKQKLA LRLSEKKGQD SEPSLNLLSP HSKGSTDSGY 400
    FSRSESAEQQ ISPPNTNAKS YEEIIFGKYC RLSPRNTLSV TPTGQERTAM 450
    GRRGIMEPLP HLNTRLEVKM FEDPISQLNP SKGEMDPGQI NMLKTTKFNS 500
    ECRQPQAIPS SVRNEGKPYP GNFLGSNPML LEAPVDSSPL IRSNSMPTSS 550
    ATNLSVPPSL RGSHSFDERM TGSDDVFYPG TVGIPPQRML RRQAAFELPS 600
    VQEGHMESEH PARVSKGLAS PSLKEKKLLP GDRPGYDYDV CRKPYKKWED 650
    SETLKQSYLG SFKQGGEYFM DPSVPVQGVP TMFGTTCENR KRRKEKSVGD 700
    EEDVPMICGG MGNAPVGMMS SEYDPKLQDG GRSGFAMTAH ESLAHGHSDR 750
    LDPARPQLPS RSPSLGSEDL PLAADPDKMT DLGKKPPGNV ISVIQHTNSL 800
    SRPNSFERSE STEMVACPQD KTPSPAETCD SEVLEAPVSP EWAPPGDGGE 850
    SGSKPTPSQQ VPQHSYHAQP RLVRQHNIQV PEIRVTEEPD KPEKEKEAPT 900
    KEPEKPVEEF QWPQRSETLS QLPAEKLPPK KKRLRLADLE HSSGESSFES 950
    TGTGLSRSPS QESNLSHSSS FSMSFDREET VKLTAPPKQD ESGKHSEFLT 1000
    VPAGSYSLSV PGHHHQKEMR RCSSEQMPCP HPTEVPEIRS KSFDYGNLSH 1050
    APVAGTSPST LSPSRERKKC FLVRQASFSG SPEIAQGEAG VDPSVKQEHM 1100
    EHLHAGLRAA WSSVLPPLPG DDPGKQVGTC GPLSSGPPLH LTQQQIMHMD 1150
    SQESLRNPLI QPTSYMTSKH LPEQPHLFPH QDAVPFSPIQ NALFQFQYPT 1200
    VCMVHLPAQQ PPWWQTHFPH PFAPHPQNSY SKPPFQADLH SSYPLEHVAE 1250
    HTGKKSADYP HAKEQTYPCY SGTSGLHSKN LPLKFPSDPG SKSTETPTEQ 1300
    LLREDFASEN AGPLQSLPGT VVPVRIQTHV PSYGSVMYTS ISQILGQNSP 1350
    AIVICKVDEN MTQRTLVTNA AMQGIGLNIA QVLGQHTGLE KYPLWKVPQT 1400
    LPLGLESSIP LCLPSTSDNA ASLGGSKRML SPASSLELFM ETKQQKRVKE 1450
    EKMYGQIVEE LSAVELTNSD IKKGLSRPQK PQLVRQGCAS EPKDGCFQSR 1500
    SSSFSSLSPS SSQDHPSASG PFPPNREILP GSRAPPRRKF SGPSESRESS 1550
    DELDMDETSS DMSMSPQSSA LPTGGGQQEE EGKARKLPVS MLVHMASGPG 1600
    GNVANSTLLF TDVADFQQIL QFPSLRTTTT VSWCFLNYTK PSFVQQATFK 1650
    SSVYASWCIS SCNPNPSGLN TKTTLALLRS KQKITAEIYT LAAMHRPGAG 1700
    KLTSSSVWKQ FAQMKPDAPF LFGNKLERKL AGNVLKERGK GEIHGDKDLG 1750
    SKQTEPIRIK IFEGGYKSNE DYVYVRGRGR GKYICEECGI RCKKPSMLKK 1800
    HIRTHTDVRP YVCKLCNFAF KTKGNLTKHM KSKAHMKKCL ELGVSMTSVD 1850
    DTETEEAENM EELHKTSEKH SMSGISTDHQ FSDAEESDGE DGDDNDDDDE 1900
    DDDDFDDQGD LTPKTRSRST SPQPPRFSSL PVNVGAVAHG VPSDSSLGHS 1950
    SLISYLVTLP SIQVTQLMTP SDSCDDTQMT EYQRLFQSKS TDSEPDKDRL 2000
    DIPSSMDEEA MLSSEPSSSP RDFSPSSYRS SPGYDSSPCR DNSPKRYLIP 2050
    KGDLSPRRHL SPRRDLSPMR HLSPRKEAAL RREMSQGDAS PRRHLSPRRP 2100
    LSPGKDITAR RDLSPRRERR YMTTIRAPSP RRALYPNPPL SMGQYLQTEP 2150
    IVLGPPNLRR GIPQVPYFSL YGDQEGAYEH HGSSLFPEGP TDYVFSHLPL 2200
    HSQQQVRAPI PMVPVGGIQM VHSLPPALSG LHPPPTLPLP TEGSEEKKGA 2250
    PGEAFAKDPY ILSRRHEKQA PQVLQSSGLP SSPSSPRLLM KQSTSEDSLN 2300
    STEREQEENI QTCTKAIASL RIATEEAALL GADPPTWVQE SPQKPLESAH 2350
    VSIRHFGGPE PGQPCTSAAH PDLHDGEKDT FGTSQTAVAH PTFYSKSSVD 2400
    EKRVDFQSSK ELSLSTEEGN EPSPEKNQLH 2430
    Length:2,430
    Mass (Da):266,705
    Last modified:October 11, 2005 - v1
    Checksum:i265694210C8A7024
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti572 – 5721G → E in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti661 – 6611S → P in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti749 – 7491D → N in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti762 – 7621S → G in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti1112 – 11121S → P in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti1211 – 12111P → S in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti1223 – 12231A → G in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti1496 – 14961C → S in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti2001 – 20011D → E in BAE23294. (PubMed:16141072)Curated
    Sequence conflicti2091 – 20911P → A in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti2122 – 21221M → L in CAA75868. (PubMed:10207097)Curated
    Sequence conflicti2263 – 22631S → C in BAE23336. (PubMed:16141072)Curated
    Sequence conflicti2294 – 22941T → A in BAE23294. (PubMed:16141072)Curated
    Sequence conflicti2314 – 23141T → A in CAA75868. (PubMed:10207097)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y15907 mRNA. Translation: CAA75868.1.
    AK137291 mRNA. Translation: BAE23294.1.
    AK137384 mRNA. Translation: BAE23336.1.
    AK147244 mRNA. Translation: BAE27792.1.
    AK147419 mRNA. Translation: BAE27900.1.
    CCDSiCCDS23704.1.
    RefSeqiNP_034567.2. NM_010437.2.
    XP_006512619.1. XM_006512556.1.
    XP_006512620.1. XM_006512557.1.
    XP_006512621.1. XM_006512558.1.
    XP_006512622.1. XM_006512559.1.
    XP_006512623.1. XM_006512560.1.
    XP_006512624.1. XM_006512561.1.
    XP_006512625.1. XM_006512562.1.
    XP_006512626.1. XM_006512563.1.
    UniGeneiMm.42157.
    Mm.484135.

    Genome annotation databases

    EnsembliENSMUST00000015645; ENSMUSP00000015645; ENSMUSG00000015501.
    GeneIDi15273.
    KEGGimmu:15273.
    UCSCiuc007elg.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y15907 mRNA. Translation: CAA75868.1 .
    AK137291 mRNA. Translation: BAE23294.1 .
    AK137384 mRNA. Translation: BAE23336.1 .
    AK147244 mRNA. Translation: BAE27792.1 .
    AK147419 mRNA. Translation: BAE27900.1 .
    CCDSi CCDS23704.1.
    RefSeqi NP_034567.2. NM_010437.2.
    XP_006512619.1. XM_006512556.1.
    XP_006512620.1. XM_006512557.1.
    XP_006512621.1. XM_006512558.1.
    XP_006512622.1. XM_006512559.1.
    XP_006512623.1. XM_006512560.1.
    XP_006512624.1. XM_006512561.1.
    XP_006512625.1. XM_006512562.1.
    XP_006512626.1. XM_006512563.1.
    UniGenei Mm.42157.
    Mm.484135.

    3D structure databases

    ProteinModelPortali Q3UHF7.
    SMRi Q3UHF7. Positions 188-244, 1782-1838.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 200314. 1 interaction.
    STRINGi 10090.ENSMUSP00000015645.

    PTM databases

    PhosphoSitei Q3UHF7.

    Proteomic databases

    PaxDbi Q3UHF7.
    PRIDEi Q3UHF7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000015645 ; ENSMUSP00000015645 ; ENSMUSG00000015501 .
    GeneIDi 15273.
    KEGGi mmu:15273.
    UCSCi uc007elg.1. mouse.

    Organism-specific databases

    CTDi 3097.
    MGIi MGI:1338076. Hivep2.

    Phylogenomic databases

    eggNOGi NOG296349.
    GeneTreei ENSGT00530000063161.
    HOGENOMi HOG000155774.
    HOVERGENi HBG007119.
    InParanoidi Q3UHF7.
    KOi K09239.
    OMAi RKKCFLV.
    OrthoDBi EOG7V1FPQ.
    PhylomeDBi Q3UHF7.
    TreeFami TF331837.

    Miscellaneous databases

    ChiTaRSi HIVEP2. mouse.
    NextBioi 287901.
    PROi Q3UHF7.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q3UHF7.
    Genevestigatori Q3UHF7.

    Family and domain databases

    Gene3Di 3.30.160.60. 4 hits.
    InterProi IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 4 hits.
    [Graphical view ]
    PROSITEi PS00028. ZINC_FINGER_C2H2_1. 4 hits.
    PS50157. ZINC_FINGER_C2H2_2. 4 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Activation of somatostatin receptor II expression by transcription factors MIBP1 and SEF-2 in the murine brain."
      Doerflinger U., Pscherer A., Moser M., Ruemmele P., Schuele R., Buettner R.
      Mol. Cell. Biol. 19:3736-3747(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INTERACTION WITH TCF4, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
      Tissue: Brain.
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6 and C57BL/6J.
      Tissue: Brain, Cerebellum and Urinary bladder.

    Entry informationi

    Entry nameiZEP2_MOUSE
    AccessioniPrimary (citable) accession number: Q3UHF7
    Secondary accession number(s): O55140, Q3UVD4, Q3UVH5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 6, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3