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Q3UH86 (Q3UH86_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Numbl MGI 894702
OrganismMus musculus (Mouse) EMBL BAE27971.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q3UH86 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 9936788A9145A5CF

FASTA56360,080
        10         20         30         40         50         60 
MNKLRQSLRR RKPAYVPEAS RPHQWQADED AVRKGTCSFP VRYLGHVEVE ESRGMHVCED 

        70         80         90        100        110        120 
AVKKLKAMGR KSVKSVLWVS ADGLRVVDDK TKDLLVDQTI EKVSFCAPDR NLDKAFSYIC 

       130        140        150        160        170        180 
RDGTTRRWIC HCFLALKDSG ERLSHAVGCA FAACLERKQR REKECGVTAA FDASRTSFAR 

       190        200        210        220        230        240 
EGSFRLSGGG RPAEREAGDK KKAEAAAAPA VAPGPAQPGH VSPTPATTSP GEKGEAGTPV 

       250        260        270        280        290        300 
AAGTTAAAIP RRHAPLEQLV RQGSFRGFPA LSQKNSPFKR QLSLRLNELP STLQRRTDFQ 

       310        320        330        340        350        360 
VKGTVPEMEP PGTGDSDGIN ALCTQISSSF ASAGAPASGP PPATTGTSAW GEPSVPAAAA 

       370        380        390        400        410        420 
FQPGHKRTPS EAERWLEEVS QVAKAQQQQQ QQQQQQQQQQ ATSVPPMPTM APTLQPFSAP 

       430        440        450        460        470        480 
VGPFDTAAAQ VAVFLPPTHM QPPFVPAYPG LGYPPMPRVP VVGITPSQMV ANAFCSAAQL 

       490        500        510        520        530        540 
QPQPATLLGK AGAFPPPAAP SAPGGQARPR PNGAPWPPEP APAPAPELDP FEAQWAALEG 

       550        560 
KPAVEKPSNP FSGDLQKTFE IEL 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE27971.1.
Tissue: Brain EMBL BAE27971.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK147523 mRNA. Translation: BAE27971.1.
RefSeqNP_035080.2. NM_010950.2.
XP_006539680.1. XM_006539617.1.
UniGeneMm.458153.

3D structure databases

ProteinModelPortalQ3UH86.
SMRQ3UH86. Positions 21-161.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000078245.

Proteomic databases

PRIDEQ3UH86.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID18223.
KEGGmmu:18223.

Organism-specific databases

CTD9253.
MGIMGI:894702. Numbl.

Phylogenomic databases

HOVERGENHBG006672.
InParanoidQ3UH86.
KOK06057.

Gene expression databases

BgeeQ3UH86.
GenevestigatorQ3UH86.

Family and domain databases

Gene3D2.30.29.30. 1 hit.
InterProIPR016698. Numb/numb-like.
IPR010449. Numb_domain.
IPR011993. PH_like_dom.
IPR006020. PTB/PI_dom.
[Graphical view]
PfamPF06311. NumbF. 1 hit.
PF00640. PID. 1 hit.
[Graphical view]
PIRSFPIRSF017607. Numb/numb-like. 1 hit.
SMARTSM00462. PTB. 1 hit.
[Graphical view]
PROSITEPS01179. PID. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSNUMBL. mouse.
NextBio293648.
SOURCESearch...

Entry information

Entry nameQ3UH86_MOUSE
AccessionPrimary (citable) accession number: Q3UH86
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)