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Q3UH37 (Q3UH37_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismMus musculus (Mouse) EMBL BAE28020.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q3UH37 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: D3A9816C2C3322CF

FASTA48251,220
        10         20         30         40         50         60 
MLAFLGAVIC IIASVPLAAS PARALPGGTD NASAASAAGG SGPQRSLSAL HSAGGSAGPS 

        70         80         90        100        110        120 
VLPGEPAASV FPPPPVPLLS RFLCTPLAAA CPSGAEQGDA AGERAELLLL QSTAEQLRQT 

       130        140        150        160        170        180 
ALQQEARIRA DRDTIRELTG KLGRCESGLP RGLQDAGPRR DTMADGAWDS PALLLELEDA 

       190        200        210        220        230        240 
VRALRDRIER IEQELPARGN ISSAPAPAMP TALHSKMDEL EGQLLAKVLA LEKERAALSH 

       250        260        270        280        290        300 
GSHQQRQEVE KELNALQGRV AELEHGSSAY SPPDAFKVSI PIRNNYMYAR VRKALPELYA 

       310        320        330        340        350        360 
FTACMWLRSR SGGSGQGTPF SYSVPGQANE IVLLEAGLEP MELLINDKVA QLPLSLKDSN 

       370        380        390        400        410        420 
WHHICISWTT RDGLWSAYQD GELRGSGENL AAWHPIKPHG ILILGQEQDT LGGRFDATQA 

       430        440        450        460        470        480 
FVGDIAQFNL WDHALTPAQV LGMANCTGPL MGNVLPWEDK LVEAFGGAKK AAFDVCKGRA 


KA 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAE28020.1.
Tissue: Brain EMBL BAE28020.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK147605 mRNA. Translation: BAE28020.1.
UniGeneMm.38438.

3D structure databases

ProteinModelPortalQ3UH37.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG003608.

Gene expression databases

BgeeQ3UH37.
GenevestigatorQ3UH37.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001759. Pentaxin.
[Graphical view]
PfamPF00354. Pentaxin. 1 hit.
[Graphical view]
PRINTSPR00895. PENTAXIN.
SMARTSM00159. PTX. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
PROSITEPS00289. PENTAXIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3UH37_MOUSE
AccessionPrimary (citable) accession number: Q3UH37
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)