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Protein
Submitted name:

Putative uncharacterized protein

Gene

Slc1a5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Slc1a5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:105305. Slc1a5.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei54 – 7926HelicalSequence analysisAdd
BLAST
Transmembranei100 – 11819HelicalSequence analysisAdd
BLAST
Transmembranei130 – 15425HelicalSequence analysisAdd
BLAST
Transmembranei236 – 25924HelicalSequence analysisAdd
BLAST
Transmembranei279 – 29921HelicalSequence analysisAdd
BLAST
Transmembranei319 – 34224HelicalSequence analysisAdd
BLAST
Transmembranei348 – 37124HelicalSequence analysisAdd
BLAST
Transmembranei391 – 41626HelicalSequence analysisAdd
BLAST
Transmembranei428 – 45730HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ3UFR4.
PeptideAtlasiQ3UFR4.
PRIDEiQ3UFR4.

PTM databases

iPTMnetiQ3UFR4.

Expressioni

Gene expression databases

GenevisibleiQ3UFR4. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104136.

Structurei

3D structure databases

ProteinModelPortaliQ3UFR4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3787. Eukaryota.
COG1301. LUCA.
HOGENOMiHOG000208776.
HOVERGENiHBG000080.
KOiK05616.

Family and domain databases

Gene3Di1.10.3860.10. 2 hits.
InterProiIPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 1 hit.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 2 hits.
PROSITEiPS00713. NA_DICARBOXYL_SYMP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UFR4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVDPPKADP KGVVAVDSTA NGGPALGSRE DQSAKAGGCC GSRDRVRRCI
60 70 80 90 100
RANLLVLLTV AAVVAGVGLG LGVSAAGGAD ALGPARLTAF AFPGELLLRL
110 120 130 140 150
LKMIILPLVV CSLIGGAASL DPSALGRVGA WALLFFLVTT LLASALGVGL
160 170 180 190 200
ALALKPGAAV TAITSINDSV VDPCARSAPT KEVLDSFLDL VRNIFPSNLV
210 220 230 240 250
SAAFRSFATS YEPKDNSCKI PQSCIQREIN STMVQLLCEV EGMNILGLVV
260 270 280 290 300
FAIVFGVALR KLGPEGELLI RFFNSFNDAT MVLVSWIMWY APVGILFLVA
310 320 330 340 350
SKIVEMKDVR QLFISLGKYI LCCLLGHAIH GLLVLPLIYF LFTRKNPYRF
360 370 380 390 400
LWGIMTPLAT AFGTSSSSAT LPLMMKCVEE KNGVAKHISR FILPIGATVN
410 420 430 440 450
MGGAALFQCV AAVFIAQLNG VSLDFVKIIT ILVTATASSV GAAGIPAGGV
460 470 480 490 500
LTLAIILEAV SLPVKDISLI LAVDWLVDRS CTVLNVEGDA FGAGLLQSYV
510 520 530 540 550
DRTKMPSSEP ELIQVKNEVS LNPLPLATEE GNPLLKQYQG PTGDSSATFE

KESVM
Length:555
Mass (Da):58,365
Last modified:October 11, 2005 - v1
Checksum:i99F434088FA7427D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK148346 mRNA. Translation: BAE28496.1.
RefSeqiNP_033227.2. NM_009201.2.
UniGeneiMm.1056.

Genome annotation databases

GeneIDi20514.
KEGGimmu:20514.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK148346 mRNA. Translation: BAE28496.1.
RefSeqiNP_033227.2. NM_009201.2.
UniGeneiMm.1056.

3D structure databases

ProteinModelPortaliQ3UFR4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104136.

PTM databases

iPTMnetiQ3UFR4.

Proteomic databases

PaxDbiQ3UFR4.
PeptideAtlasiQ3UFR4.
PRIDEiQ3UFR4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi20514.
KEGGimmu:20514.

Organism-specific databases

CTDi6510.
MGIiMGI:105305. Slc1a5.

Phylogenomic databases

eggNOGiKOG3787. Eukaryota.
COG1301. LUCA.
HOGENOMiHOG000208776.
HOVERGENiHBG000080.
KOiK05616.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

GenevisibleiQ3UFR4. MM.

Family and domain databases

Gene3Di1.10.3860.10. 2 hits.
InterProiIPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 1 hit.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 2 hits.
PROSITEiPS00713. NA_DICARBOXYL_SYMP_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3UFR4_MOUSE
AccessioniPrimary (citable) accession number: Q3UFR4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 6, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.