Q3UF47 (Q3UF47_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE28714.1

Gene names

Name:

Dmd MGI 94909

Organism

Mus musculus (Mouse) EMBL BAE28714.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Repeat SAAS SAAS018159
Gene Ontology (GO)
Biological_process	establishment of blood-nerve barrier Inferred from mutant phenotype PubMed 12673830. Source: MGI establishment of glial blood-brain barrier Inferred from mutant phenotype PubMed 12673830. Source: MGI muscle cell homeostasis Inferred from mutant phenotype PubMed 6583703. Source: MGI muscle fiber development Inferred from genetic interaction PubMed 8007658. Source: MGI myotube cell development Inferred from mutant phenotype PubMed 19535499. Source: MGI neurotransmitter receptor metabolic process Inferred from mutant phenotype PubMed 9334395. Source: MGI nucleus localization Inferred from mutant phenotype PubMed 19535499. Source: MGI olfactory nerve structural organization Inferred from mutant phenotype PubMed 18586242. Source: MGI regulation of transcription, DNA-dependent Inferred from mutant phenotype PubMed 7919967. Source: MGI
Cellular_component	Z disc Inferred from direct assay PubMed 7890770. Source: MGI cell-substrate junction Inferred from direct assay PubMed 7890770. Source: MGI dystrophin-associated glycoprotein complex Inferred from direct assay PubMed 7890770. Source: MGI membrane raft Inferred from direct assay PubMed 11259414. Source: MGI neuron projection terminus Inferred from direct assay PubMed 12115694. Source: MGI sarcolemma Inferred from direct assay PubMed 11115849PubMed 11259414PubMed 16371353PubMed 16810681PubMed 8663016. Source: MGI synapse Inferred from direct assay PubMed 10995443. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3UF47 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 988CEBDFB9D4F1D0	FASTA	360	42,104
	10 20 30 40 50 60 MQQDQCCSPR FKLKMLHRKT YHVKDLQGEI ETHTDIYHNL DENGQKILRS LEGSDEAPLL 70 80 90 100 110 120 QRRLDNMNFK WSELQKKSLN IRSHLEASSD QWKRLHLSLQ ELLVWLQLKD DELSRQAPIG 130 140 150 160 170 180 GDFPAVQKQN DIHRAFKREL KTKEPVIMST LETVRIFLTE QPLEGLEKLY QEPRELPPEE 190 200 210 220 230 240 RAQNVTRLLR NQAEEVNAEW DKLNLRSADW QRKIDEALER LQELQEAADE LDLKLRQAEV 250 260 270 280 290 300 IKGSWQPVGD LLIDSLQDHL EKVKALRGEI APLKENVNRV NDLAHQLTTL GIQLSPYNLS 310 320 330 340 350 360 TLEDLNTRWR LLQVAVEDRV RQLHEAHRDF GPASQHFLST SVQGPWERAI SPNKVPYYIK

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[2]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[3]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[4]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[5]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[6]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
[8]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE28714.1. Tissue: Sympathetic ganglion EMBL BAE28714.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK149002 mRNA. Translation: BAE28714.1.
IPI	IPI00652554.
UniGene	Mm.275608. Mm.416750.
3D structure databases
ProteinModelPortal	Q3UF47.
SMR	Q3UF47. Positions 332-359.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3UF47.
Proteomic databases
PRIDE	Q3UF47.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	uc009trm.1. mouse.
Organism-specific databases
MGI	MGI:94909. Dmd.
Gene expression databases
ArrayExpress	Q3UF47.
Genevestigator	Q3UF47.
Family and domain databases
InterPro	IPR018159. Spectrin/alpha-actinin. IPR002017. Spectrin_repeat. [Graphical view]
Pfam	PF00435. Spectrin. 1 hit. [Graphical view]
SMART	SM00150. SPEC. 3 hits. [Graphical view]
ProtoNet	Search...
Other
SOURCE	Search...

Entry information

Entry name

Q3UF47_MOUSE

Accession

Primary (citable) accession number: Q3UF47

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)