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Protein

60S ribosomal protein L6

Gene

Rpl6

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L6UniRule annotation
Gene namesi
Name:Rpl6Imported
ORF Names:mCG_16023Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:108057. Rpl6.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiQ3UCH0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000029614.
ExpressionAtlasiQ3UCH0. baseline and differential.

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 103Ribosomal_L6e_NInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL6 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1694. Eukaryota.
COG2163. LUCA.
HOVERGENiHBG002565.
KOiK02934.
OMAiRKGDKPH.
OrthoDBiEOG091G0L13.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR000915. 60S_ribosomal_L6E.
IPR014722. Rib_L2_dom2.
IPR005568. Ribosomal_L6_N.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR10715. PTHR10715. 1 hit.
PfamiView protein in Pfam
PF01159. Ribosomal_L6e. 1 hit.
PF03868. Ribosomal_L6e_N. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01170. RIBOSOMAL_L6E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3UCH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGEKAPDTK EKKPAAKKAG SDAAASRPRA AKVAKKVHPK GKKPKKAKPH
60 70 80 90 100
CSRNPVLVRG IGRYSRSAMY SRKALYKRKY SAAKTKVEKK KKKEKVLATV
110 120 130 140 150
TKTVGGDKNG GTRVVKLRKM PRYYPTEDVP RKLLSHGKKP FSQHVRRLRS
160 170 180 190 200
SITPGTVLII LTGRHRGKRV VFLKQLDSGL LLVTGPLVIN RVPLRRTHQK
210 220 230 240 250
FVIATSTKVD ISDVKIPKHL TDAYFKKKQL RKPRHQEGEI FDTEKEKYEI
260 270 280 290
TEQRKADQKA VDLQILPKIK AVPQLQGYLR SQFSLTNGMY PHKLVF
Length:296
Mass (Da):33,510
Last modified:October 11, 2005 - v1
Checksum:iD65D5EF517660836
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC106121 mRNA. Translation: AAI06122.1.
AK135175 mRNA. Translation: BAE22452.1.
AK150540 mRNA. Translation: BAE29643.1.
AK151022 mRNA. Translation: BAE30040.1.
AK151344 mRNA. Translation: BAE30322.1.
AK151759 mRNA. Translation: BAE30666.1.
AK153208 mRNA. Translation: BAE31807.1.
AK153507 mRNA. Translation: BAE32052.1.
AK167439 mRNA. Translation: BAE39525.1.
CH466529 Genomic DNA. Translation: EDL19738.1.
RefSeqiNP_035420.2. NM_011290.5.
XP_006530290.1. XM_006530227.1.
UniGeneiMm.262021.

Genome annotation databases

GeneIDi19988.
KEGGimmu:19988.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ3UCH0_MOUSE
AccessioniPrimary (citable) accession number: Q3UCH0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 5, 2017
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)