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Q3U7I0 (Q3U7I0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:B4galt5 MGI 1927169
OrganismMus musculus (Mouse) EMBL BAE31389.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length260 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE31389.1

Sequences

Sequence LengthMass (Da)Tools
Q3U7I0 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 91457D9783E9F2E9

FASTA26030,269
        10         20         30         40         50         60 
MSEIAMDDIH ELFSRDPAIK LGGHWKPADC VPRWKVAILI PFRNRHEHLP VLLRHLLPML 

        70         80         90        100        110        120 
QRQRLQFAFY VIEQVGTQPF NRAMLFNVGF QEAMKDLDWD CLIFHDVDHI PESDRNYYGC 

       130        140        150        160        170        180 
GQMPRHFATK LDKYMYLLPY TEFFGGVSGL TVEQFRKING FPNAFWGWGG EDDDLWNRVQ 

       190        200        210        220        230        240 
NAGYSVSRPE GDTGKYKSIP HHHRGEVQFL GRYALLRKSK ERQGLDGLNN LNYSANVTYD 

       250        260 
ALYKNITVNL TPELAQVTEY 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE31389.1.
Tissue: Bone marrow EMBL BAE31389.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK151469 mRNA. Translation: BAE30427.1.
AK152652 mRNA. Translation: BAE31389.1.
RefSeqNP_062809.2. NM_019835.2.
UniGeneMm.200886.
Mm.489868.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

DNASU56336.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID56336.
KEGGmmu:56336.

Organism-specific databases

CTD9334.
MGIMGI:1927169. B4galt5.

Phylogenomic databases

HOVERGENHBG058334.
InParanoidQ3U7I0.
KOK09905.

Gene expression databases

GenevestigatorQ3U7I0.

Family and domain databases

Gene3D3.90.550.10. 1 hit.
InterProIPR003859. Galactosyl_T.
IPR027791. Galactosyl_T_C.
IPR027995. Galactosyl_T_N.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PANTHERPTHR19300. PTHR19300. 1 hit.
PfamPF02709. Glyco_transf_7C. 1 hit.
PF13733. Glyco_transf_7N. 1 hit.
[Graphical view]
PRINTSPR02050. B14GALTRFASE.
SUPFAMSSF53448. SSF53448. 1 hit.
ProtoNetSearch...

Other

ChiTaRSB4GALT5. mouse.
NextBio312326.
SOURCESearch...

Entry information

Entry nameQ3U7I0_MOUSE
AccessionPrimary (citable) accession number: Q3U7I0
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)