SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q3U6U5

- GTPB6_MOUSE

UniProt

Q3U6U5 - GTPB6_MOUSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative GTP-binding protein 6

Gene
Gtpbp6
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Cofactori

Magnesium By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi298 – 2981Magnesium By similarity
Metal bindingi319 – 3191Magnesium By similarity

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

GTP-binding, Magnesium, Metal-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative GTP-binding protein 6
Gene namesi
Name:Gtpbp6
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 5

Organism-specific databases

MGIiMGI:1306825. Gtpbp6.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 514514Putative GTP-binding protein 6PRO_0000304799Add
BLAST

Proteomic databases

PaxDbiQ3U6U5.
PRIDEiQ3U6U5.

PTM databases

PhosphoSiteiQ3U6U5.

Expressioni

Gene expression databases

BgeeiQ3U6U5.
CleanExiMM_GTPBP6.
GenevestigatoriQ3U6U5.

Structurei

3D structure databases

ProteinModelPortaliQ3U6U5.
SMRiQ3U6U5. Positions 149-438.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini285 – 449165Hflx-type GAdd
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG2262.
GeneTreeiENSGT00390000001397.
HOGENOMiHOG000260368.
HOVERGENiHBG052970.
InParanoidiQ3U6U5.
OrthoDBiEOG7WHH9P.
TreeFamiTF315022.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR006073. GTP_binding_domain.
IPR016496. GTPase_HflX.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR10229. PTHR10229. 1 hit.
PfamiPF01926. MMR_HSR1. 1 hit.
[Graphical view]
PIRSFiPIRSF006809. GTP-binding_hflX_prd. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR03156. GTP_HflX. 1 hit.
PROSITEiPS51705. G_HFLX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3U6U5-1 [UniParc]FASTAAdd to Basket

« Hide

MLFLRAAVLP GFWLPRVRRV QLVRSPAVTL PSPVRTVHAG SRVWGSAWAG    50
GGPVRGGGEE DPREDEEEEE DELLRAPPLL PLDTQRVCVL HPDVKRPAGK 100
KPRSTAEWQV AEAAALVRAL PGWSVASTLV VPSAAPGSRL VFGKGNFQDV 150
TEKIKGCQDI TSVFLNVERM APPTKKELES AWGLRVFDRF TLVLHIFRCN 200
ARTREARMQL ALAEIPLLRS SVNTDSGQQD QQGWGSRYIM GSGESPTELR 250
ARALRDRELR LRRVLERLRD KRRLMRKERV RREFPVVSVV GYTNCGKTTL 300
IQALTGEAAL QPRDQPFATL DVTVHAGLLP SRLRILYVDT IGFLSQLPHN 350
LIHAFSATLE DVAYSDVLVH VTDVSHPDAE LQKATVLSTL RGLHLPPALL 400
ESALEVHSKV DLVPGYTPPC SGALAVSAIS GRGLDELKAA LEASVLRATG 450
RQVLTLCVRL GGPQLGWLYK EAVVQQVQEL PEGDAAHVTV VITQAAYGRF 500
RKLFPIDAPS ALPH 514
Length:514
Mass (Da):56,475
Last modified:October 11, 2005 - v1
Checksum:i95774C6439C0B3E6
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti350 – 3501N → S in BAE26076. 1 Publication
Sequence conflicti350 – 3501N → S in BAE35103. 1 Publication
Sequence conflicti501 – 5011R → G in BAE35103. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK144812 mRNA. Translation: BAE26076.1.
AK152225 mRNA. Translation: BAE31052.1.
AK152972 mRNA. Translation: BAE31629.1.
AK159462 mRNA. Translation: BAE35103.1.
CCDSiCCDS51604.1.
RefSeqiNP_660129.2. NM_145147.5.
UniGeneiMm.86267.

Genome annotation databases

EnsembliENSMUST00000077220; ENSMUSP00000076458; ENSMUSG00000033434.
GeneIDi107999.
KEGGimmu:107999.
UCSCiuc008ypr.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK144812 mRNA. Translation: BAE26076.1 .
AK152225 mRNA. Translation: BAE31052.1 .
AK152972 mRNA. Translation: BAE31629.1 .
AK159462 mRNA. Translation: BAE35103.1 .
CCDSi CCDS51604.1.
RefSeqi NP_660129.2. NM_145147.5.
UniGenei Mm.86267.

3D structure databases

ProteinModelPortali Q3U6U5.
SMRi Q3U6U5. Positions 149-438.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q3U6U5.

Proteomic databases

PaxDbi Q3U6U5.
PRIDEi Q3U6U5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000077220 ; ENSMUSP00000076458 ; ENSMUSG00000033434 .
GeneIDi 107999.
KEGGi mmu:107999.
UCSCi uc008ypr.2. mouse.

Organism-specific databases

CTDi 8225.
MGIi MGI:1306825. Gtpbp6.

Phylogenomic databases

eggNOGi COG2262.
GeneTreei ENSGT00390000001397.
HOGENOMi HOG000260368.
HOVERGENi HBG052970.
InParanoidi Q3U6U5.
OrthoDBi EOG7WHH9P.
TreeFami TF315022.

Miscellaneous databases

NextBioi 359857.
PROi Q3U6U5.
SOURCEi Search...

Gene expression databases

Bgeei Q3U6U5.
CleanExi MM_GTPBP6.
Genevestigatori Q3U6U5.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR006073. GTP_binding_domain.
IPR016496. GTPase_HflX.
IPR027417. P-loop_NTPase.
[Graphical view ]
PANTHERi PTHR10229. PTHR10229. 1 hit.
Pfami PF01926. MMR_HSR1. 1 hit.
[Graphical view ]
PIRSFi PIRSF006809. GTP-binding_hflX_prd. 1 hit.
SUPFAMi SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR03156. GTP_HflX. 1 hit.
PROSITEi PS51705. G_HFLX. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Bone marrow and Lung.

Entry informationi

Entry nameiGTPB6_MOUSE
AccessioniPrimary (citable) accession number: Q3U6U5
Secondary accession number(s): Q3TX13, Q3UMM2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: October 11, 2005
Last modified: July 9, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi