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Q3U687

- Q3U687_MOUSE

UniProt

Q3U687 - Q3U687_MOUSE

Protein
Submitted name:

Protein 2010002M12Rik

Gene

2010002M12Rik

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    ReactomeiREACT_198533. ISG15 antiviral mechanism.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein 2010002M12RikImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:2010002M12RikImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 19

    Organism-specific databases

    MGIiMGI:2148249. 2010002M12Rik.

    Expressioni

    Gene expression databases

    GenevestigatoriQ3U687.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000093816.

    Family & Domainsi

    Keywords - Domaini

    RepeatUniRule annotation, TPR repeatUniRule annotationSAAS annotation

    Phylogenomic databases

    eggNOGiNOG285705.
    GeneTreeiENSGT00390000013876.
    HOGENOMiHOG000001558.
    HOVERGENiHBG066330.
    InParanoidiQ3U687.
    OMAiNIEDHIL.
    OrthoDBiEOG71K62V.
    TreeFamiTF342671.

    Family and domain databases

    Gene3Di1.25.40.10. 2 hits.
    InterProiIPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view]
    PfamiPF00515. TPR_1. 1 hit.
    PF13181. TPR_8. 1 hit.
    [Graphical view]
    SMARTiSM00028. TPR. 6 hits.
    [Graphical view]
    PROSITEiPS50005. TPR. 4 hits.
    PS50293. TPR_REGION. 3 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3U687-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEQLLSPSNM SEESHKSHIH DSLDELRCHF TWELDIKDKH IHDLEIKISE    50
    TEFRDPIYSI GMHNLLAYVR HLKGQQDEAL QSLKEAEALI QSEQLSKRSL 100
    ATWGNCAWLH YHRGSLAEAQ VYLDKVEKVC KEFSSPFRYR LECAEMDCEE 150
    GWALRKCGSQ NYTRAMACFE RALKVEPENP EYNAGYADVA YHLDYYDGNS 200
    LQPLKKAVSV KPEDPYLKVL LALKLQDLRK TDEAEKHIKE ATLTISSQNN 250
    IFGYVAKFYR RKGCVEEALG FLKKALETKP SSPYLHFQIG LCHKTQFFQM 300
    KKATSRENRK RADQSCHLAI CHFKKTLELK PTYDRAYIDL AEVYAKNHQQ 350
    KEAEDNFQEV LSMSNLGDYM QQEIHFRYGN FQQYYKKSEE AAITHYLKGL 400
    KIEVTSHYRD KLLKALEELA EGRKEDHVLE SLSLLGLVCR LRGDTSEAMS 450
    CYEKALRLTG AVNPEF 466
    Length:466
    Mass (Da):54,065
    Last modified:October 11, 2005 - v1
    Checksum:i5E260419AA33DC10
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC016791 Genomic DNA. No translation available.
    BC138202 mRNA. Translation: AAI38203.1.
    AK136525 mRNA. Translation: BAE23025.1.
    AK153247 mRNA. Translation: BAE31838.1.
    RefSeqiNP_444447.1. NM_053217.2.
    UniGeneiMm.440727.

    Genome annotation databases

    EnsembliENSMUST00000087357; ENSMUSP00000093816; ENSMUSG00000067297.
    ENSMUST00000112463; ENSMUSP00000108082; ENSMUSG00000067297.
    GeneIDi112419.
    KEGGimmu:112419.
    UCSCiuc008hgs.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC016791 Genomic DNA. No translation available.
    BC138202 mRNA. Translation: AAI38203.1 .
    AK136525 mRNA. Translation: BAE23025.1 .
    AK153247 mRNA. Translation: BAE31838.1 .
    RefSeqi NP_444447.1. NM_053217.2.
    UniGenei Mm.440727.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000093816.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000087357 ; ENSMUSP00000093816 ; ENSMUSG00000067297 .
    ENSMUST00000112463 ; ENSMUSP00000108082 ; ENSMUSG00000067297 .
    GeneIDi 112419.
    KEGGi mmu:112419.
    UCSCi uc008hgs.1. mouse.

    Organism-specific databases

    MGIi MGI:2148249. 2010002M12Rik.

    Phylogenomic databases

    eggNOGi NOG285705.
    GeneTreei ENSGT00390000013876.
    HOGENOMi HOG000001558.
    HOVERGENi HBG066330.
    InParanoidi Q3U687.
    OMAi NIEDHIL.
    OrthoDBi EOG71K62V.
    TreeFami TF342671.

    Enzyme and pathway databases

    Reactomei REACT_198533. ISG15 antiviral mechanism.

    Miscellaneous databases

    NextBioi 367915.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3U687.

    Family and domain databases

    Gene3Di 1.25.40.10. 2 hits.
    InterProi IPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view ]
    Pfami PF00515. TPR_1. 1 hit.
    PF13181. TPR_8. 1 hit.
    [Graphical view ]
    SMARTi SM00028. TPR. 6 hits.
    [Graphical view ]
    PROSITEi PS50005. TPR. 4 hits.
    PS50293. TPR_REGION. 3 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: BrainImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    8. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    9. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and CecumImported.
    10. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    11. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3U687_MOUSE
    AccessioniPrimary (citable) accession number: Q3U687
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3