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Protein
Submitted name:

High density lipoprotein (HDL) binding protein, isoform CRA_d

Gene

Hdlbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
High density lipoprotein (HDL) binding protein, isoform CRA_dImported
Gene namesi
Name:HdlbpImported
ORF Names:mCG_16583Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:99256. Hdlbp.

PTM / Processingi

Keywords - PTMi

LipoproteinImported

Expressioni

Gene expression databases

BgeeiENSMUSG00000034088.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043047.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 212KHInterPro annotationAdd BLAST63
Domaini222 – 284KHInterPro annotationAdd BLAST63
Domaini295 – 357KHInterPro annotationAdd BLAST63
Domaini364 – 424KHInterPro annotationAdd BLAST61
Domaini435 – 497KHInterPro annotationAdd BLAST63
Domaini507 – 570KHInterPro annotationAdd BLAST64
Domaini581 – 643KHInterPro annotationAdd BLAST63
Domaini653 – 716KHInterPro annotationAdd BLAST64
Domaini727 – 790KHInterPro annotationAdd BLAST64
Domaini800 – 863KHInterPro annotationAdd BLAST64
Domaini873 – 967KHInterPro annotationAdd BLAST95
Domaini972 – 1034KHInterPro annotationAdd BLAST63
Domaini1052 – 1117KHInterPro annotationAdd BLAST66
Domaini1127 – 1190KHInterPro annotationAdd BLAST64

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili776 – 807Sequence analysisAdd BLAST32
Coiled coili849 – 873Sequence analysisAdd BLAST25

Sequence similaritiesi

Contains 14 KH domains.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2208. Eukaryota.
ENOG410XQFV. LUCA.
HOVERGENiHBG054107.
OMAiVMISFPR.
OrthoDBiEOG091G00NZ.

Family and domain databases

Gene3Di3.30.1370.10. 15 hits.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF00013. KH_1. 14 hits.
[Graphical view]
SMARTiSM00322. KH. 14 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 15 hits.
PROSITEiPS50084. KH_TYPE_1. 14 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3U4Z7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSVAVLTQE SFAEHRSGLV PQQIKVATLN SEEENDPPTY KDAFPPLPEK
60 70 80 90 100
AACLESAQEP AGAWSNKIRP IKASVITQVF HVPLEERKYK DMNQFGEGEQ
110 120 130 140 150
AKICLEIMQR TGAHLELSLA KDQGLSIMVS GKLDAVMKAR KDIVARLQTQ
160 170 180 190 200
ASATVPIPKE HHRFVIGKNG EKLQDLELKT ATKIQIPRPD DPSNQIKITG
210 220 230 240 250
TKEGIEKARH EVLLISAEQD KRAVERLEVE KAFHPFIAGP YNRLVGEIMQ
260 270 280 290 300
ETGTRINIPP PSVNRTEIVF TGEKEQLAQA VARIKKIYEE KKKKTTTIAV
310 320 330 340 350
EVKKSQHKYV IGPKGNSLQE ILERTGVSVE IPPSDSISET VILRGEPEKL
360 370 380 390 400
GQALTEVYAK ANSFTVSSVS APSWLHRFII GKKGQNLAKI TQQMPKVHIE
410 420 430 440 450
FTEGEDKITL EGPTEDVNVA QEQIEGMVKD LINRMDYVEI NIDHKFHRHL
460 470 480 490 500
IGKSGANINR IKDQYKVSVR IPPDSEKSNL IRIEGDPQGV QQAKRELLEL
510 520 530 540 550
ASRMENERTK DLIIEQRFHR TIIGQKGERI REIRDKFPEV IINFPDPAQK
560 570 580 590 600
SDIVQLRGPK NEVEKCTKYM QKMVADLVEN SYSISVPIFK QFHKNIIGKG
610 620 630 640 650
GANIKKIREE SNTKIDLPAE NSNSETIIIT GKRANCEAAR SRILSIQKDL
660 670 680 690 700
ANIAEVEVSI PAKLHNSLIG TKGRLIRSIM EECGGVHIHF PVEGSGSDTV
710 720 730 740 750
VIRGPSSDVE KAKKQLLHLA EEKQTKSFTV DIRAKPEYHK FLIGKGGGKI
760 770 780 790 800
RKVRDSTGAR IIFPAAEDKD QDLITIIGKE DAVREAQKEL EALIQNLENV
810 820 830 840 850
VEDYMLVDPK HHRHFVIRRG QVLREIAEEY GGVMVSFPRS GTQSDKVTLK
860 870 880 890 900
GAKDCVEAAK KRIQEIIEDL EAQVTVECAI PQKFHRSVMG PKGSRIQQIT
910 920 930 940 950
RDYNVQIKFP DREENPVHSV EPSIQENGDE AGEGREAKET DPGSPRRCDI
960 970 980 990 1000
IIISGRKEKC EAAKEALEAL VPVTIEVEVP FDLHRYIIGQ KGSGIRKMMD
1010 1020 1030 1040 1050
EFEVNIHVPA PELQSDTIAI TGLAANLDRA KAGLLDRVKE LQAEQEDRAL
1060 1070 1080 1090 1100
RSFKLSVTVD PKYHPKIIGR KGAVITQIRL EHEVNIQFPD KDDGNQPQDQ
1110 1120 1130 1140 1150
ITITGYEKNT EAARDAILKI VGELEQMVSE DVPLDHRVHA RIIGARGKAI
1160 1170 1180 1190 1200
RKIMDEFKVD IRFPQSGAPD PNCVTVTGLP ENVEEAIDHI LNLEEEYLAD
1210 1220 1230 1240 1250
VVDSEALQVY MKPPAHEESR APSKGFVVRD APWTSNSSEK APDMSSSEEF
1260
PSFGAQVAPK TLPWGPKR
Length:1,268
Mass (Da):141,743
Last modified:October 11, 2005 - v1
Checksum:i2502F3D4E9EE230C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK153965 mRNA. Translation: BAE32283.1.
CH466520 Genomic DNA. Translation: EDL39952.1.
CH466520 Genomic DNA. Translation: EDL39953.1.
CH466520 Genomic DNA. Translation: EDL39957.1.
RefSeqiNP_001288293.1. NM_001301364.1.
NP_598569.1. NM_133808.5.
XP_006529137.1. XM_006529074.2.
XP_006529138.1. XM_006529075.2.
XP_006529139.1. XM_006529076.2.
XP_006529140.1. XM_006529077.3.
UniGeneiMm.30012.

Genome annotation databases

GeneIDi110611.
KEGGimmu:110611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK153965 mRNA. Translation: BAE32283.1.
CH466520 Genomic DNA. Translation: EDL39952.1.
CH466520 Genomic DNA. Translation: EDL39953.1.
CH466520 Genomic DNA. Translation: EDL39957.1.
RefSeqiNP_001288293.1. NM_001301364.1.
NP_598569.1. NM_133808.5.
XP_006529137.1. XM_006529074.2.
XP_006529138.1. XM_006529075.2.
XP_006529139.1. XM_006529076.2.
XP_006529140.1. XM_006529077.3.
UniGeneiMm.30012.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043047.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi110611.
KEGGimmu:110611.

Organism-specific databases

CTDi3069.
MGIiMGI:99256. Hdlbp.

Phylogenomic databases

eggNOGiKOG2208. Eukaryota.
ENOG410XQFV. LUCA.
HOVERGENiHBG054107.
OMAiVMISFPR.
OrthoDBiEOG091G00NZ.

Miscellaneous databases

ChiTaRSiHdlbp. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000034088.

Family and domain databases

Gene3Di3.30.1370.10. 15 hits.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF00013. KH_1. 14 hits.
[Graphical view]
SMARTiSM00322. KH. 14 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 15 hits.
PROSITEiPS50084. KH_TYPE_1. 14 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3U4Z7_MOUSE
AccessioniPrimary (citable) accession number: Q3U4Z7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.