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Q3U224

- Q3U224_MOUSE

UniProt

Q3U224 - Q3U224_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Elmsan1, C130039O16Rik
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. chromatin binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Elmsan1Imported
Synonyms:C130039O16RikImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2685106. Elmsan1.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ3U224.

PTM databases

PhosphoSiteiQ3U224.

Expressioni

Gene expression databases

ArrayExpressiQ3U224.
BgeeiQ3U224.
GenevestigatoriQ3U224.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000105923.

Structurei

3D structure databases

ProteinModelPortaliQ3U224.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG287797.
HOGENOMiHOG000111818.
HOVERGENiHBG081263.
InParanoidiQ3U224.
PhylomeDBiQ3U224.

Family and domain databases

InterProiIPR000949. ELM2_dom.
IPR009057. Homeodomain-like.
IPR001005. SANT/Myb.
IPR017884. SANT_dom.
[Graphical view]
PfamiPF01448. ELM2. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS51156. ELM2. 1 hit.
PS51293. SANT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3U224-1 [UniParc]FASTAAdd to Basket

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MNLQAQSKAQ SKRKRCPFGD QEPAAKEQPP PLQSPPQSLR AKEEQYGAHE     50
GPTGVASTTQ PVELSPPNNL ALLNSVVYGS ERTTAAMLSQ QAQVSSVKWP 100
SSVMAPGRGL ERGGGGGISD SGWQQQPGQP PPHSTWNHLP LYGGPKGSPH 150
PGVGVPPYYN HPEALKGNKP GGPQLDHYGN AVQPMVPQKV QLEVGRPQAP 200
LNSFHAAKKP PNQTLPLQPF QLAFGHQVNR QVFRQGPQPS NPTASFPPQK 250
QQQQQQPAAL PQMQLFENYY PMHQLPSQQH QDFGLAPGGP LGQTHLAHRS 300
MAPYPFSHNP DMNPELRKAL LQDPASQPVL PQPQMAFPRR SRRLSKEGIL 350
PSNSLDGAGT QPGQEPASNL FLHHWSLPQP PPGTLGQPHS EALGFPLELR 400
ESQMLADGDR LAPNGREREP PAMGNEEVMR AGGLGDCGQM IRSGVIQSTK 450
RRRRVSQEAN LLTLAQKAVE LASMQDANGS EEKRKSVLAT TSRCGVEFSE 500
PALAAKRARE ESGMVPLIIP VSVPVRTVGP TEVAQVGGAD EDGTGLEQYP 550
TEHKPSVIVT RRRSTRVPGT DAAAQAEDLN VKLEGEPSMR KPKQRPRPEP 600
LIIPTKAGTF IAPPVYSNIT PYQSHLRSPV RLADHPSERS FEPPPYTPPP 650
ILSPVREGSG LYFNAIISTS NIPAPPPITP KSAHRTLLRS NSSEVTPPVL 700
SVMGEATPVS IEPRINVGTR FQAEIPMMRD RALAAFDPHK ADLVWQPWEH 750
LESSWEKQRQ VDDLLTAACS SIFPGAGTNQ ELALHYLHES RGDILEALNK 800
LLLRKPLRPH NHPLATYHYT GSDQWKTAER KLFNKGIAIY KKDFFLVQKL 850
IQTKTVAQCV EFYYTYKKQV KIGRNGTLTF GDLDIGDEKS GQEEVEVDVK 900
TSQKFPRVPP PRRESPSEER LEPKREVTEP RKEGEEEVPD TQEKGEQEEG 950
RERCRRAAAV KATQTLQANE AANDVLILRS HEPNAPGSAG IQTSEKPREG 1000
PGKSRRALPF T 1011
Length:1,011
Mass (Da):111,007
Last modified:October 11, 2005 - v1
Checksum:i77E74C3BC56FA71A
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1011 – 10111Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK155547 mRNA. Translation: BAE33318.1.
UniGeneiMm.31256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK155547 mRNA. Translation: BAE33318.1 .
UniGenei Mm.31256.

3D structure databases

ProteinModelPortali Q3U224.
ModBasei Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000105923.

PTM databases

PhosphoSitei Q3U224.

Proteomic databases

PaxDbi Q3U224.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:2685106. Elmsan1.

Phylogenomic databases

eggNOGi NOG287797.
HOGENOMi HOG000111818.
HOVERGENi HBG081263.
InParanoidi Q3U224.
PhylomeDBi Q3U224.

Miscellaneous databases

ChiTaRSi C130039O16Rik. mouse.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q3U224.
Bgeei Q3U224.
Genevestigatori Q3U224.

Family and domain databases

InterProi IPR000949. ELM2_dom.
IPR009057. Homeodomain-like.
IPR001005. SANT/Myb.
IPR017884. SANT_dom.
[Graphical view ]
Pfami PF01448. ELM2. 1 hit.
[Graphical view ]
SMARTi SM00717. SANT. 1 hit.
[Graphical view ]
SUPFAMi SSF46689. SSF46689. 1 hit.
PROSITEi PS51156. ELM2. 1 hit.
PS51293. SANT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.

Entry informationi

Entry nameiQ3U224_MOUSE
AccessioniPrimary (citable) accession number: Q3U224
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 9, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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