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Q3U224

- Q3U224_MOUSE

UniProt

Q3U224 - Q3U224_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Elmsan1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. chromatin binding Source: InterPro
    2. DNA binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Elmsan1Imported
    Synonyms:C130039O16RikImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:2685106. Elmsan1.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PaxDbiQ3U224.

    PTM databases

    PhosphoSiteiQ3U224.

    Expressioni

    Gene expression databases

    ArrayExpressiQ3U224.
    BgeeiQ3U224.
    GenevestigatoriQ3U224.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000105923.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3U224.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG287797.
    HOGENOMiHOG000111818.
    HOVERGENiHBG081263.
    InParanoidiQ3U224.
    PhylomeDBiQ3U224.

    Family and domain databases

    InterProiIPR000949. ELM2_dom.
    IPR009057. Homeodomain-like.
    IPR001005. SANT/Myb.
    IPR017884. SANT_dom.
    [Graphical view]
    PfamiPF01448. ELM2. 1 hit.
    [Graphical view]
    SMARTiSM00717. SANT. 1 hit.
    [Graphical view]
    SUPFAMiSSF46689. SSF46689. 1 hit.
    PROSITEiPS51156. ELM2. 1 hit.
    PS51293. SANT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q3U224-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNLQAQSKAQ SKRKRCPFGD QEPAAKEQPP PLQSPPQSLR AKEEQYGAHE     50
    GPTGVASTTQ PVELSPPNNL ALLNSVVYGS ERTTAAMLSQ QAQVSSVKWP 100
    SSVMAPGRGL ERGGGGGISD SGWQQQPGQP PPHSTWNHLP LYGGPKGSPH 150
    PGVGVPPYYN HPEALKGNKP GGPQLDHYGN AVQPMVPQKV QLEVGRPQAP 200
    LNSFHAAKKP PNQTLPLQPF QLAFGHQVNR QVFRQGPQPS NPTASFPPQK 250
    QQQQQQPAAL PQMQLFENYY PMHQLPSQQH QDFGLAPGGP LGQTHLAHRS 300
    MAPYPFSHNP DMNPELRKAL LQDPASQPVL PQPQMAFPRR SRRLSKEGIL 350
    PSNSLDGAGT QPGQEPASNL FLHHWSLPQP PPGTLGQPHS EALGFPLELR 400
    ESQMLADGDR LAPNGREREP PAMGNEEVMR AGGLGDCGQM IRSGVIQSTK 450
    RRRRVSQEAN LLTLAQKAVE LASMQDANGS EEKRKSVLAT TSRCGVEFSE 500
    PALAAKRARE ESGMVPLIIP VSVPVRTVGP TEVAQVGGAD EDGTGLEQYP 550
    TEHKPSVIVT RRRSTRVPGT DAAAQAEDLN VKLEGEPSMR KPKQRPRPEP 600
    LIIPTKAGTF IAPPVYSNIT PYQSHLRSPV RLADHPSERS FEPPPYTPPP 650
    ILSPVREGSG LYFNAIISTS NIPAPPPITP KSAHRTLLRS NSSEVTPPVL 700
    SVMGEATPVS IEPRINVGTR FQAEIPMMRD RALAAFDPHK ADLVWQPWEH 750
    LESSWEKQRQ VDDLLTAACS SIFPGAGTNQ ELALHYLHES RGDILEALNK 800
    LLLRKPLRPH NHPLATYHYT GSDQWKTAER KLFNKGIAIY KKDFFLVQKL 850
    IQTKTVAQCV EFYYTYKKQV KIGRNGTLTF GDLDIGDEKS GQEEVEVDVK 900
    TSQKFPRVPP PRRESPSEER LEPKREVTEP RKEGEEEVPD TQEKGEQEEG 950
    RERCRRAAAV KATQTLQANE AANDVLILRS HEPNAPGSAG IQTSEKPREG 1000
    PGKSRRALPF T 1011
    Length:1,011
    Mass (Da):111,007
    Last modified:October 11, 2005 - v1
    Checksum:i77E74C3BC56FA71A
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1011 – 10111Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK155547 mRNA. Translation: BAE33318.1.
    UniGeneiMm.31256.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK155547 mRNA. Translation: BAE33318.1 .
    UniGenei Mm.31256.

    3D structure databases

    ProteinModelPortali Q3U224.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000105923.

    PTM databases

    PhosphoSitei Q3U224.

    Proteomic databases

    PaxDbi Q3U224.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:2685106. Elmsan1.

    Phylogenomic databases

    eggNOGi NOG287797.
    HOGENOMi HOG000111818.
    HOVERGENi HBG081263.
    InParanoidi Q3U224.
    PhylomeDBi Q3U224.

    Miscellaneous databases

    ChiTaRSi C130039O16Rik. mouse.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q3U224.
    Bgeei Q3U224.
    Genevestigatori Q3U224.

    Family and domain databases

    InterProi IPR000949. ELM2_dom.
    IPR009057. Homeodomain-like.
    IPR001005. SANT/Myb.
    IPR017884. SANT_dom.
    [Graphical view ]
    Pfami PF01448. ELM2. 1 hit.
    [Graphical view ]
    SMARTi SM00717. SANT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46689. SSF46689. 1 hit.
    PROSITEi PS51156. ELM2. 1 hit.
    PS51293. SANT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.

    Entry informationi

    Entry nameiQ3U224_MOUSE
    AccessioniPrimary (citable) accession number: Q3U224
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)