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Protein
Submitted name:

Madcam1 protein

Gene

Madcam1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Madcam1 proteinImported
Submitted name:
Mucosal vascular addressin cell adhesion molecule 1, isoform CRA_bImported
Gene namesi
Name:Madcam1Imported
ORF Names:mCG_13392Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:103579 Madcam1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei222 – 244HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501430912922 – 261Sequence analysisAdd BLAST240

Expressioni

Gene expression databases

ExpressionAtlasiQ3U1B3 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiQ3U1B3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini110 – 218Adhes-Ig_likeInterPro annotationAdd BLAST109

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili156 – 176Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J133 Eukaryota
ENOG411140D LUCA

Family and domain databases

Gene3Di2.60.40.10, 2 hits
InterProiView protein in InterPro
IPR015169 Adhes-Ig-like
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR037413 MADCAM1
PANTHERiPTHR14162 PTHR14162, 2 hits
PfamiView protein in Pfam
PF09085 Adhes-Ig_like, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD336606 Adhes-Ig-like, 1 hit
SUPFAMiSSF48726 SSF48726, 2 hits

Sequencei

Sequence statusi: Complete.

Q3U1B3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESILALLLA LALVPYQLSR GQSFQVNPPE SEVAVAMGTS LQITCSMSCD
60 70 80 90 100
EGVARVHWRG LDTSLGSVQT LPGSSILSVR GMLSDTGTPV CVGSCGSRSF
110 120 130 140 150
QHSVKILVYA FPDQLVVSPE FLVPGQDQVV SCTAHNIWPA DPNSLSFALL
160 170 180 190 200
LGEQRLEGAQ ALEPEQEEEI QEAEGTPLFR MTQRWRLPSL GTPAPPALHC
210 220 230 240 250
QVTMQLPKLV LTHRKEIPAS TVVLWIGSLV LGLLALVFLA YRLWKCYRPG
260
PRPDTSSCTH L
Length:261
Mass (Da):28,357
Last modified:October 11, 2005 - v1
Checksum:iBD1F0984799DF3B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC115910 mRNA Translation: AAI15911.1
BC118056 mRNA Translation: AAI18057.1
AK156096 mRNA Translation: BAE33586.1
CH466553 Genomic DNA Translation: EDL31683.1
RefSeqiXP_006513356.1, XM_006513293.3
UniGeneiMm.391556

Genome annotation databases

GeneIDi17123
UCSCiuc007fzg.1 mouse

Similar proteinsi

Entry informationi

Entry nameiQ3U1B3_MOUSE
AccessioniPrimary (citable) accession number: Q3U1B3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 23, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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