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Protein
Submitted name:

Madcam1 protein

Gene

Madcam1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-MMU-198933. Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell.
R-MMU-216083. Integrin cell surface interactions.

Names & Taxonomyi

Protein namesi
Submitted name:
Madcam1 proteinImported
Submitted name:
Mucosal vascular addressin cell adhesion molecule 1, isoform CRA_bImported
Gene namesi
Name:Madcam1Imported
ORF Names:mCG_13392Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:103579. Madcam1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei222 – 244HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501084332622 – 261Sequence analysisAdd BLAST240

Structurei

3D structure databases

SMRiQ3U1B3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini110 – 218Adhes-Ig_likeInterPro annotationAdd BLAST109

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J133. Eukaryota.
ENOG411140D. LUCA.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiView protein in InterPro
IPR015169. Adhes-Ig-like.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
PfamiView protein in Pfam
PF09085. Adhes-Ig_like. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD336606. Adhes-Ig-like. 1 hit.
SUPFAMiSSF48726. SSF48726. 2 hits.

Sequencei

Sequence statusi: Complete.

Q3U1B3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESILALLLA LALVPYQLSR GQSFQVNPPE SEVAVAMGTS LQITCSMSCD
60 70 80 90 100
EGVARVHWRG LDTSLGSVQT LPGSSILSVR GMLSDTGTPV CVGSCGSRSF
110 120 130 140 150
QHSVKILVYA FPDQLVVSPE FLVPGQDQVV SCTAHNIWPA DPNSLSFALL
160 170 180 190 200
LGEQRLEGAQ ALEPEQEEEI QEAEGTPLFR MTQRWRLPSL GTPAPPALHC
210 220 230 240 250
QVTMQLPKLV LTHRKEIPAS TVVLWIGSLV LGLLALVFLA YRLWKCYRPG
260
PRPDTSSCTH L
Length:261
Mass (Da):28,357
Last modified:October 11, 2005 - v1
Checksum:iBD1F0984799DF3B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC115910 mRNA. Translation: AAI15911.1.
BC118056 mRNA. Translation: AAI18057.1.
AK156096 mRNA. Translation: BAE33586.1.
CH466553 Genomic DNA. Translation: EDL31683.1.
RefSeqiXP_006513356.1. XM_006513293.3.
UniGeneiMm.391556.

Genome annotation databases

GeneIDi17123.
UCSCiuc007fzg.1. mouse.

Similar proteinsi

Entry informationi

Entry nameiQ3U1B3_MOUSE
AccessioniPrimary (citable) accession number: Q3U1B3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 27, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)