Q3U0Y9 (Q3U0Y9_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE33712.1

Gene names

Name:	Farsa MGI 1913840
Synonyms:	Farsla MGI 1913840

Organism

Mus musculus (Mouse) EMBL BAE33712.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	186 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Sequences

	Sequence		Length	Mass (Da)
	Q3U0Y9 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 789BEA6A34D6827A	FASTA	186	20,732
	10 20 30 40 50 60 MADNPVLELL LRRLEVADGG LDSAELATQL GVEHQAVVGA VKSLQALGEV IEAELRSTKC 70 80 90 100 110 120 WELTTEGEEI AREGSHEARV FRSIPLEGLV QSELMHLPSG KVGFSKAMSN KWIRVDKSAA 130 140 150 160 170 180 DGPRVFRVVD SIEDEVQKRL QLVQAGQAEK LAEKERNELR KRKLLTEVIL KTYWVSKGQG LQHKRV

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[2]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[3]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[4]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[5]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[6]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[7]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.
[8]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE33712.1. Tissue: Activated spleen EMBL BAE33712.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK156442 mRNA. Translation: BAE33712.1.
IPI	IPI00754704.
UniGene	Mm.292517.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3U0Y9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	roNOG05416.
InParanoid	Q3U0Y9.
Gene expression databases
ArrayExpress	Q3U0Y9.
Bgee	Q3U0Y9.
Genevestigator	Q3U0Y9.
Family and domain databases
InterPro	IPR013196. HTH_11. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF08279. HTH_11. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3U0Y9_MOUSE

Accession

Primary (citable) accession number: Q3U0Y9

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	October 19, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)