Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q3U0X6

- Q3U0X6_MOUSE

UniProt

Q3U0X6 - Q3U0X6_MOUSE

Protein
Submitted name:

Protein Zfp217

Gene

Zfp217

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. transcription regulatory region DNA binding Source: Ensembl

    GO - Biological processi

    1. negative regulation of transcription, DNA-templated Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Zfp217Imported
    Submitted name:
    Zinc finger protein 217Imported
    Gene namesi
    Name:Zfp217Imported
    ORF Names:mCG_6549Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:2685408. Zfp217.

    Subcellular locationi

    GO - Cellular componenti

    1. histone deacetylase complex Source: Ensembl

    Expressioni

    Gene expression databases

    GenevestigatoriQ3U0X6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000067334.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG319981.
    GeneTreeiENSGT00530000063100.
    HOGENOMiHOG000276541.
    HOVERGENiHBG061769.
    InParanoidiQ3U0X6.
    OMAiTGNMPTQ.
    OrthoDBiEOG7CNZFG.
    TreeFamiTF332241.

    Family and domain databases

    Gene3Di3.30.160.60. 4 hits.
    InterProiIPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF00096. zf-C2H2. 1 hit.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 8 hits.
    [Graphical view]
    PROSITEiPS00028. ZINC_FINGER_C2H2_1. 6 hits.
    PS50157. ZINC_FINGER_C2H2_2. 6 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3U0X6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPTQSLLVYM DGPEVLSSSL GSQMEVDDAV PIKGPVAVPF RAAQEKSMAV     50
    AEGHMPLDCM FCSQVFSQAE DLSQHVLLQH RPTLCEPAVL RVEAEYLSPL 100
    DKALEPTEPA LEKSGEDPEE LSCDVCGQTF PVAFDVESHM KKHKDSFTYG 150
    CSMCGRRFKE PWFLKNHMRT HNGKSGTRSK LQQGMESPVT INEVVQPHAP 200
    GSISTPYKIC MVCGFLFPNK QSLIEHSKVH AKETVPSASN VAPDDHREEP 250
    TSPREELLQF LNLRPRSTAG STVKPMTCIP QLDPFTTYQA WQLATKGKVA 300
    VAQEEVKESG QEGSTDNDDS CSEKEELGEI WVGGKAEGSG KSKTSKSSCP 350
    GLSQDKEKPR HANSEVPSGD SDPKLSSSKE KPTHCSECSK AFRTYHQLVL 400
    HSRVHRKDRR TDALSPTMAV DARQPGTCSP DLSTTLEDSG AGDREGGSED 450
    GSEDGLPDGL HLDKNDDGGK AKPLPSSREC SYCGKFFRSN YYLNIHLRTH 500
    TGEKPYKCEF CEYAAAQKTS LRYHLERHHK DKQPVDAAAE SKSEGRSQEP 550
    QDALLTAADS AQTKNLKRFL DGAKDVKGSP PAKQLKEMPS VFQSVLSPAH 600
    SNDTQDFHKH AADSAEKARK SPAPTYLDMQ RKKAGEPQAS SPVCRLEGVG 650
    SLAREAGHRE KMDQDADYRH KPGADCQDRP LNLSLGPLHA CPAISLSKCL 700
    IPSIACPFCT FKTFYPEVLM MHQRLEHRYN PDPHKNGSSK SVLRNRRTGC 750
    PPALLGKDVP PLSGLHKPKA KTAFSPHSKS LHSEKARQGA SGPSKAPQTS 800
    GPDNSTLAPS NLKSHRSQPN AGGTSATRQQ QSELFPKGGV PAAMDKVKRP 850
    EPKLKSLPAS PSQSPLSSNN SNGSVEYPVK VDGPWAQQGR DYYCHRNSGS 900
    AAAEYSEPHP KRLKSSAVSL DTEHAGTNGR RGFELPKYHV VRSITSLLPP 950
    ECVRPPPVLP HKARFLSPGE VESPSVLAVQ KPYSASGPLY TCGPVGHAGG 1000
    SPALEGKRPV SHQHLSNSML QKRSYENFIG NTHYRPNDKK P 1041
    Length:1,041
    Mass (Da):113,600
    Last modified:October 11, 2005 - v1
    Checksum:i610BB8BCC936C50D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844576 Genomic DNA. No translation available.
    BC116329 mRNA. Translation: AAI16330.1.
    BC116330 mRNA. Translation: AAI16331.1.
    AK156475 mRNA. Translation: BAE33725.1.
    CH466551 Genomic DNA. Translation: EDL06576.1.
    RefSeqiNP_001028471.1. NM_001033299.3.
    NP_001153155.1. NM_001159683.1.
    XP_006499490.1. XM_006499427.1.
    XP_006499491.1. XM_006499428.1.
    XP_006499492.1. XM_006499429.1.
    XP_006499493.1. XM_006499430.1.
    XP_006499494.1. XM_006499431.1.
    XP_006499495.1. XM_006499432.1.
    XP_006499496.1. XM_006499433.1.
    UniGeneiMm.22858.

    Genome annotation databases

    EnsembliENSMUST00000063710; ENSMUSP00000067334; ENSMUSG00000052056.
    ENSMUST00000109155; ENSMUSP00000104783; ENSMUSG00000052056.
    GeneIDi228913.
    KEGGimmu:228913.
    UCSCiuc008obu.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844576 Genomic DNA. No translation available.
    BC116329 mRNA. Translation: AAI16330.1 .
    BC116330 mRNA. Translation: AAI16331.1 .
    AK156475 mRNA. Translation: BAE33725.1 .
    CH466551 Genomic DNA. Translation: EDL06576.1 .
    RefSeqi NP_001028471.1. NM_001033299.3.
    NP_001153155.1. NM_001159683.1.
    XP_006499490.1. XM_006499427.1.
    XP_006499491.1. XM_006499428.1.
    XP_006499492.1. XM_006499429.1.
    XP_006499493.1. XM_006499430.1.
    XP_006499494.1. XM_006499431.1.
    XP_006499495.1. XM_006499432.1.
    XP_006499496.1. XM_006499433.1.
    UniGenei Mm.22858.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000067334.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000063710 ; ENSMUSP00000067334 ; ENSMUSG00000052056 .
    ENSMUST00000109155 ; ENSMUSP00000104783 ; ENSMUSG00000052056 .
    GeneIDi 228913.
    KEGGi mmu:228913.
    UCSCi uc008obu.2. mouse.

    Organism-specific databases

    CTDi 228913.
    MGIi MGI:2685408. Zfp217.

    Phylogenomic databases

    eggNOGi NOG319981.
    GeneTreei ENSGT00530000063100.
    HOGENOMi HOG000276541.
    HOVERGENi HBG061769.
    InParanoidi Q3U0X6.
    OMAi TGNMPTQ.
    OrthoDBi EOG7CNZFG.
    TreeFami TF332241.

    Miscellaneous databases

    NextBioi 379250.
    PROi Q3U0X6.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3U0X6.

    Family and domain databases

    Gene3Di 3.30.160.60. 4 hits.
    InterProi IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF00096. zf-C2H2. 1 hit.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 8 hits.
    [Graphical view ]
    PROSITEi PS00028. ZINC_FINGER_C2H2_1. 6 hits.
    PS50157. ZINC_FINGER_C2H2_2. 6 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    6. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: PCR rescued clonesImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    9. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    10. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NODImported.
      Tissue: Activated spleenImported.
    11. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    12. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    13. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3U0X6_MOUSE
    AccessioniPrimary (citable) accession number: Q3U0X6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3