Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q3TZW7 (BEX6_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein BEX6
Alternative name(s):
Brain-expressed X-linked protein 6 homolog
Gene names
Name:Bex6
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length114 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cytoplasm Ref.1.

Post-translational modification

Ubiquitinated Probable. Degraded by the proteasome. Ref.1

Miscellaneous

The human orthologous protein seems not to exist.

Sequence similarities

Belongs to the BEX family.

Ontologies

Keywords
   Cellular componentCytoplasm
   PTMUbl conjugation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from direct assay Ref.1. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 114114Protein BEX6
PRO_0000229789

Sequences

Sequence LengthMass (Da)Tools
Q3TZW7 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 206939778CBCB7DD

FASTA11413,353
        10         20         30         40         50         60 
MMSKVKQVIQ DLTVEKDKGG EASRHSEEES HLLEEVETKN PGGYVKRKVR RLVCNFRWPT 

        70         80         90        100        110 
PNRHVDHSEG REDAGRFVGQ ETEAKRKSQE QWMRFSKWFL TPESDSHYNL GLIP

« Hide

References

« Hide 'large scale' references
[1]"Characterization of the Bex gene family in humans, mice, and rats."
Alvarez E., Zhou W., Witta S.E., Freed C.R.
Gene 357:18-28(2005) [PubMed: 15958283] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, DEGRADATION BY THE PROTEASOME.
Strain: C57BL/6.
[2]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J and NOD.
Tissue: Egg and Spleen.
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY833559 mRNA. Translation: AAX40677.1.
AK139543 mRNA. Translation: BAE24057.1.
AK157452 mRNA. Translation: BAE34090.1.
AK163328 mRNA. Translation: BAE37302.1.
BC132130 mRNA. Translation: AAI32131.1.
BC132132 mRNA. Translation: AAI32133.1.
IPIIPI00346669.
RefSeqNP_001028711.1. NM_001033539.2.
UniGeneMm.441006.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ3TZW7.

Proteomic databases

PRIDEQ3TZW7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000099990; ENSMUSP00000097570; ENSMUSG00000075269.
GeneID328660.
KEGGmmu:328660.
UCSCuc007yyk.1. mouse.

Organism-specific databases

CTD328660.
MGIMGI:3588247. Bex6.

Phylogenomic databases

GeneTreeENSGT00410000025646.
HOGENOMHBG127440.
HOVERGENHBG080240.
InParanoidQ3TZW7.
OrthoDBEOG4ZKJNP.

Gene expression databases

ArrayExpressQ3TZW7.
BgeeQ3TZW7.
CleanExMM_BEX6.
GenevestigatorQ3TZW7.
GermOnlineENSMUSG00000075269. Mus musculus.

Family and domain databases

InterProIPR021156. TF_A-like/BEX-like.
[Graphical view]
PfamPF04538. BEX. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio398391.
SOURCESearch...

Entry information

Entry nameBEX6_MOUSE
AccessionPrimary (citable) accession number: Q3TZW7
Secondary accession number(s): A2RSJ0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: October 11, 2005
Last modified: September 21, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents