Q3TZP5 (Q3TZP5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE34163.1

Gene names

Name:

Dcc MGI 94869

Organism

Mus musculus (Mouse) EMBL BAE34163.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	1140 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Repeat SAAS SAAS013098
Gene Ontology (GO)
Biological_process	anterior/posterior axon guidance Inferred from mutant phenotype PubMed 18479186. Source: MGI dorsal/ventral axon guidance Inferred from mutant phenotype PubMed 17898206. Source: MGI neuron migration Inferred from mutant phenotype PubMed 16267219. Source: MGI spinal cord ventral commissure morphogenesis Inferred from mutant phenotype PubMed 9126737. Source: MGI
Cellular_component	axon Inferred from direct assay PubMed 9331350. Source: MGI
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1140	1	EMBL BAE34163.1

Sequences

	Sequence		Length	Mass (Da)
	Q3TZP5 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 9422349842E623D4	FASTA	1,140	125,805
	10 20 30 40 50 60 MENSLGCVWV PKLAFVLFGA SLLSAHLQVT GFQIKPFTSL HFVSEPSEAV TMRGGNVLLN 70 80 90 100 110 120 CSAESDRGVP VIKWKKDGLI LALGMDDRKQ QLPNGSLLIQ NILHSRHHKP DEGLYQCEAS 130 140 150 160 170 180 LADSGSIISR TAKVTVAGPL RFLSQTESIT AFMGDTVLLK CEVIGEPMPT IHWQKNQQDL 190 200 210 220 230 240 NPLPGDSRVV VLPSGALQIS RLQPGDSGVY RCSARNPASI RTGNEAEVRI LSDPGLHRQL 250 260 270 280 290 300 YFLQRPSNVI AIEGKDAVLE CCVSGYPPPS FTWLRGEEVI QLRSKKYSLL GGSNLLISNV 310 320 330 340 350 360 TDDDSGTYTC VVTYKNENIS ASAELTVLVP PWFLNHPSNL YAYESMDIEF ECAVSGKPVP 370 380 390 400 410 420 TVNWMKNGDV VIPSDYFQIV GGSNLRILGV VKSDEGFYQC VAENEAGNAQ SSAQLIVPKP 430 440 450 460 470 480 AIPSSSILPS APRDVLPVLV SSRFVRLSWR PPAEAKGNIQ TFTVFFSREG DNRERALNTT 490 500 510 520 530 540 QPGSLQLTVG NLKPEAMYTF RVVAYNEWGP GESSQPIKVA TQPELQVPGP VENLHAVSTS 550 560 570 580 590 600 PTSILITWEP PAYANGPVQG YRLFCTEVST GKEQNIEVDG LSYKLEGLKK FTEYTLRFLA 610 620 630 640 650 660 YNRYGPGVST DDITVVTLSD VPSAPPQNIS LEVVNSRSIK VSWLPPPSGT QNGFITGYKI 670 680 690 700 710 720 RHRKTTRRGE METLEPNNLW YLFTGLEKGS QYSFQVSAMT VNGTGPPSNW YTAETPENDL 730 740 750 760 770 780 DESQVPDQPS SLHVRPQTNC IIMSWTPPLN PNIVVRGYII GYGVGSPYAE TVRVDSKQRY 790 800 810 820 830 840 YSIERLESSS HYVISLKAFN NAGEGVPLYE SATTRSITDV STPMLPPVGV QAVALTHEAV 850 860 870 880 890 900 RVSWADNSVP KNQKTSDVRL YTVRWRTSFS ASAKYKSEDT TSLSYTATGL KPNTMYEFSV 910 920 930 940 950 960 MVTKNRRSST WSMTAHATTY EAAPTSAPKD LTVITREGKP RAVIVSWQPP LEANGKITAY 970 980 990 1000 1010 1020 ILFYTLDKNI PIDDWIMETI SGDRLTHQIM DLSLDTMYYF RIQARNVKGV GPLSDPILFR 1030 1040 1050 1060 1070 1080 TLKVEHPDKM ANDQGRHGDG GYWPVDTNLI DRSTLNEPPI GQMHPPHGSV TPQKNSNLLV 1090 1100 1110 1120 1130 1140 ITVVTVGVLT VLVVVIVAVI CTRRSSAQQR KKRATHSVSK RKGSQKDLRP PDLWIHHEEM

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[2]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[3]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[4]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[5]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[6]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
[8]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE34163.1. Tissue: Parthenogenote EMBL BAE34163.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK157715 mRNA. Translation: BAE34163.1.
IPI	IPI01008315.
RefSeq	NP_031857.2. NM_007831.3.
UniGene	Mm.167882.
3D structure databases
ProteinModelPortal	Q3TZP5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	13176.
KEGG	mmu:13176.
Organism-specific databases
CTD	1630.
MGI	MGI:94869. Dcc.
Phylogenomic databases
HOGENOM	HOG000230686.
HOVERGEN	HBG005455.
KO	K06765.
Gene expression databases
Genevestigator	Q3TZP5.
Family and domain databases
Gene3D	2.60.40.10. 10 hits.
InterPro	IPR003961. Fibronectin_type3. IPR007110. Ig-like_dom. IPR013783. Ig-like_fold. IPR013098. Ig_I-set. IPR003599. Ig_sub. IPR003598. Ig_sub2. [Graphical view]
Pfam	PF00041. fn3. 6 hits. PF07679. I-set. 3 hits. [Graphical view]
SMART	SM00060. FN3. 6 hits. SM00409. IG. 1 hit. SM00408. IGc2. 3 hits. [Graphical view]
SUPFAM	SSF49265. FN_III-like. 6 hits.
PROSITE	PS50853. FN3. 6 hits. PS50835. IG_LIKE. 4 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	283280.
SOURCE	Search...

Entry information

Entry name

Q3TZP5_MOUSE

Accession

Primary (citable) accession number: Q3TZP5

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	April 3, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)