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Protein
Submitted name:

Putative uncharacterized protein

Gene

Dnajb1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Dnajb1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1931874. Dnajb1.

PTM / Processingi

Proteomic databases

PaxDbiQ3TYL7.

Expressioni

Gene expression databases

BgeeiQ3TYL7.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005620.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini64 – 223160DnaJ_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0714. Eukaryota.
COG0484. LUCA.
HOVERGENiHBG066727.

Family and domain databases

InterProiIPR002939. DnaJ_C.
IPR008971. HSP40/DnaJ_pept-bd.
[Graphical view]
PfamiPF01556. DnaJ_C. 1 hit.
[Graphical view]
SUPFAMiSSF49493. SSF49493. 2 hits.

Sequencei

Sequence statusi: Complete.

Q3TYL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFAEFFGGRN PFDTFFGQRN GEEGMDIDDT FSSFPMGMGG FTNMNFGRSR
60 70 80 90 100
PSQEPTRKKQ DPPVTHDLRV SLEEIYSGCT KKMKISHKRL NPDGKSIRNE
110 120 130 140 150
DKILTIEVKR GWKEGTKITF PKEGDQTSNN IPADIVFVLK DKPHNIFKRD
160 170 180 190 200
GSDVIYPARI SLREALCGCT VNVPTLDGRT IPVVFKDVIR PGMRRKVPGE
210 220 230 240
GLPLPKTPEK RGDLVIEFEV IFPERIPVSS RTILEQVLPI
Length:240
Mass (Da):27,123
Last modified:October 11, 2005 - v1
Checksum:i4D5FDD68C1318A70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK158530 mRNA. Translation: BAE34546.1.
RefSeqiNP_001295156.1. NM_001308227.1.
XP_006531581.1. XM_006531518.1.
UniGeneiMm.282092.
Mm.420989.
Mm.478920.

Genome annotation databases

GeneIDi81489.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK158530 mRNA. Translation: BAE34546.1.
RefSeqiNP_001295156.1. NM_001308227.1.
XP_006531581.1. XM_006531518.1.
UniGeneiMm.282092.
Mm.420989.
Mm.478920.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005620.

Proteomic databases

PaxDbiQ3TYL7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi81489.

Organism-specific databases

CTDi3337.
MGIiMGI:1931874. Dnajb1.

Phylogenomic databases

eggNOGiKOG0714. Eukaryota.
COG0484. LUCA.
HOVERGENiHBG066727.

Miscellaneous databases

ChiTaRSiDnajb1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ3TYL7.

Family and domain databases

InterProiIPR002939. DnaJ_C.
IPR008971. HSP40/DnaJ_pept-bd.
[Graphical view]
PfamiPF01556. DnaJ_C. 1 hit.
[Graphical view]
SUPFAMiSSF49493. SSF49493. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Visual cortexImported.

Entry informationi

Entry nameiQ3TYL7_MOUSE
AccessioniPrimary (citable) accession number: Q3TYL7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 11, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.