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Q3TWR2

- Q3TWR2_MOUSE

UniProt

Q3TWR2 - Q3TWR2_MOUSE

Protein
Submitted name:

Gamma-aminobutyric acid type B receptor subunit 1

Gene

Gabbr1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: MGI

    GO - Biological processi

    1. gamma-aminobutyric acid signaling pathway Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Gamma-aminobutyric acid type B receptor subunit 1Imported
    Gene namesi
    Name:Gabbr1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 17

    Organism-specific databases

    MGIiMGI:1860139. Gabbr1.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: MGI
    2. G-protein coupled receptor dimeric complex Source: MGI
    3. membrane Source: MGI
    4. postsynaptic membrane Source: MGI
    5. presynaptic membrane Source: MGI

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ3TWR2.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063129.
    HOVERGENiHBG084876.
    OMAiLIRACHF.

    Family and domain databases

    InterProiIPR000436. Sushi_SCR_CCP.
    [Graphical view]
    PfamiPF00084. Sushi. 2 hits.
    [Graphical view]
    SMARTiSM00032. CCP. 2 hits.
    [Graphical view]
    SUPFAMiSSF57535. SSF57535. 2 hits.
    PROSITEiPS50923. SUSHI. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3TWR2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLLLLLVPLF LRPLGAGGAQ TPNVTSEGCQ IIHPPWEGGI RYRGLTRDQV    50
    KAINFLPVDY EIEYVCRGER EVVGPKVRKC LANGSWTDMD TPSRCVRICS 100
    KSYLTLENGK VFLTGGDLPA LDGARVDFRC DPDFHLVGSS RSICSQGQWS 150
    TPKPHCQGEG NSCLPAADEG ACPRMGVGWE WVEGMDGCYE ECRGGVWEDA 200
    GETYLYTTHL PQTWFHGPFC WASPHPPFL 229
    Length:229
    Mass (Da):25,338
    Last modified:October 11, 2005 - v1
    Checksum:i569017248E6C7A51
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC116130 Genomic DNA. No translation available.
    AK159584 mRNA. Translation: BAE35204.1.
    UniGeneiMm.32191.

    Genome annotation databases

    EnsembliENSMUST00000172789; ENSMUSP00000134580; ENSMUSG00000024462.
    ENSMUST00000174456; ENSMUSP00000134409; ENSMUSG00000024462.
    UCSCiuc008clz.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC116130 Genomic DNA. No translation available.
    AK159584 mRNA. Translation: BAE35204.1 .
    UniGenei Mm.32191.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000172789 ; ENSMUSP00000134580 ; ENSMUSG00000024462 .
    ENSMUST00000174456 ; ENSMUSP00000134409 ; ENSMUSG00000024462 .
    UCSCi uc008clz.1. mouse.

    Organism-specific databases

    MGIi MGI:1860139. Gabbr1.

    Phylogenomic databases

    GeneTreei ENSGT00530000063129.
    HOVERGENi HBG084876.
    OMAi LIRACHF.

    Miscellaneous databases

    ChiTaRSi GABBR1. mouse.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3TWR2.

    Family and domain databases

    InterProi IPR000436. Sushi_SCR_CCP.
    [Graphical view ]
    Pfami PF00084. Sushi. 2 hits.
    [Graphical view ]
    SMARTi SM00032. CCP. 2 hits.
    [Graphical view ]
    SUPFAMi SSF57535. SSF57535. 2 hits.
    PROSITEi PS50923. SUSHI. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3TWR2_MOUSE
    AccessioniPrimary (citable) accession number: Q3TWR2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3