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Q3TWH3

- Q3TWH3_MOUSE

UniProt

Q3TWH3 - Q3TWH3_MOUSE

Protein
Submitted name:

MCG12570

Gene

Pnrc1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MCG12570Imported
    Submitted name:
    Protein Pnrc1Imported
    Gene namesi
    Name:Pnrc1Imported
    ORF Names:mCG_12570Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 4

    Organism-specific databases

    MGIiMGI:1917838. Pnrc1.

    Expressioni

    Gene expression databases

    GenevestigatoriQ3TWH3.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063881.
    HOVERGENiHBG053626.
    InParanoidiQ3TWH3.
    OMAiHFLGGDG.
    OrthoDBiEOG7W41CG.
    TreeFamiTF333211.

    Family and domain databases

    InterProiIPR026780. PNRC1/2.
    [Graphical view]
    PANTHERiPTHR15405. PTHR15405. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q3TWH3-1 [UniParc]FASTAAdd to Basket

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    MTVVSVPQRD LALSGRLAPL GFLGALPMVN PAPPPLPRLP DPRALPPTLF    50
    LPHFLGGDGP CLAPAPRTTA PSGCTLAPAA APRAAPKKRR KKKVRASPAG 100
    QLPSRFHQFQ QHRPSLEGGR SPAPGPIVAQ EERGLAATAL LHRQPPLAKE 150
    VLKSKMGKSE KIALPHSQLV HGIHLCEQPK INRQKSKYNL PLTKITSAKR 200
    NESDFWQDSA SSDRMQKQEK KSFKNTENIK SNHLKKSAFL TEVSQKENYA 250
    GAKFSDPPSP SVLPKPPSHW MGSTAENPSQ SRELMAVHLK TLLKVQT 297
    Length:297
    Mass (Da):32,347
    Last modified:October 11, 2005 - v1
    Checksum:iD91AD323E9F50A80
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL670464 Genomic DNA. No translation available.
    AL772272 Genomic DNA. No translation available.
    AK159693 mRNA. Translation: BAE35293.1.
    CH466538 Genomic DNA. Translation: EDL05486.1.
    RefSeqiNP_001028397.2. NM_001033225.2.
    UniGeneiMm.27769.

    Genome annotation databases

    EnsembliENSMUST00000049357; ENSMUSP00000040377; ENSMUSG00000040128.
    GeneIDi108767.
    KEGGimmu:108767.
    UCSCiuc008sfu.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL670464 Genomic DNA. No translation available.
    AL772272 Genomic DNA. No translation available.
    AK159693 mRNA. Translation: BAE35293.1 .
    CH466538 Genomic DNA. Translation: EDL05486.1 .
    RefSeqi NP_001028397.2. NM_001033225.2.
    UniGenei Mm.27769.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    DNASUi 108767.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000049357 ; ENSMUSP00000040377 ; ENSMUSG00000040128 .
    GeneIDi 108767.
    KEGGi mmu:108767.
    UCSCi uc008sfu.1. mouse.

    Organism-specific databases

    CTDi 10957.
    MGIi MGI:1917838. Pnrc1.

    Phylogenomic databases

    GeneTreei ENSGT00530000063881.
    HOVERGENi HBG053626.
    InParanoidi Q3TWH3.
    OMAi HFLGGDG.
    OrthoDBi EOG7W41CG.
    TreeFami TF333211.

    Miscellaneous databases

    NextBioi 361299.
    PROi Q3TWH3.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3TWH3.

    Family and domain databases

    InterProi IPR026780. PNRC1/2.
    [Graphical view ]
    PANTHERi PTHR15405. PTHR15405. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    6. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    8. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    9. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
    10. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    12. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3TWH3_MOUSE
    AccessioniPrimary (citable) accession number: Q3TWH3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3