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Q3TWH3

- Q3TWH3_MOUSE

UniProt

Q3TWH3 - Q3TWH3_MOUSE

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Protein
Submitted name:

MCG12570

Gene

Pnrc1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
MCG12570Imported
Submitted name:
Protein Pnrc1Imported
Gene namesi
Name:Pnrc1Imported
ORF Names:mCG_12570Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:1917838. Pnrc1.

Expressioni

Gene expression databases

GenevestigatoriQ3TWH3.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063881.
HOVERGENiHBG053626.
OMAiHFLGGDG.
OrthoDBiEOG7W41CG.
TreeFamiTF333211.

Family and domain databases

InterProiIPR026780. PNRC1/2.
[Graphical view]
PANTHERiPTHR15405. PTHR15405. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3TWH3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTVVSVPQRD LALSGRLAPL GFLGALPMVN PAPPPLPRLP DPRALPPTLF
60 70 80 90 100
LPHFLGGDGP CLAPAPRTTA PSGCTLAPAA APRAAPKKRR KKKVRASPAG
110 120 130 140 150
QLPSRFHQFQ QHRPSLEGGR SPAPGPIVAQ EERGLAATAL LHRQPPLAKE
160 170 180 190 200
VLKSKMGKSE KIALPHSQLV HGIHLCEQPK INRQKSKYNL PLTKITSAKR
210 220 230 240 250
NESDFWQDSA SSDRMQKQEK KSFKNTENIK SNHLKKSAFL TEVSQKENYA
260 270 280 290
GAKFSDPPSP SVLPKPPSHW MGSTAENPSQ SRELMAVHLK TLLKVQT
Length:297
Mass (Da):32,347
Last modified:October 11, 2005 - v1
Checksum:iD91AD323E9F50A80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL670464 Genomic DNA. No translation available.
AL772272 Genomic DNA. No translation available.
AK159693 mRNA. Translation: BAE35293.1.
CH466538 Genomic DNA. Translation: EDL05486.1.
RefSeqiNP_001028397.2. NM_001033225.2.
UniGeneiMm.27769.

Genome annotation databases

EnsembliENSMUST00000049357; ENSMUSP00000040377; ENSMUSG00000040128.
GeneIDi108767.
KEGGimmu:108767.
UCSCiuc008sfu.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL670464 Genomic DNA. No translation available.
AL772272 Genomic DNA. No translation available.
AK159693 mRNA. Translation: BAE35293.1 .
CH466538 Genomic DNA. Translation: EDL05486.1 .
RefSeqi NP_001028397.2. NM_001033225.2.
UniGenei Mm.27769.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

DNASUi 108767.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000049357 ; ENSMUSP00000040377 ; ENSMUSG00000040128 .
GeneIDi 108767.
KEGGi mmu:108767.
UCSCi uc008sfu.1. mouse.

Organism-specific databases

CTDi 10957.
MGIi MGI:1917838. Pnrc1.

Phylogenomic databases

GeneTreei ENSGT00530000063881.
HOVERGENi HBG053626.
OMAi HFLGGDG.
OrthoDBi EOG7W41CG.
TreeFami TF333211.

Miscellaneous databases

NextBioi 361299.
PROi Q3TWH3.
SOURCEi Search...

Gene expression databases

Genevestigatori Q3TWH3.

Family and domain databases

InterProi IPR026780. PNRC1/2.
[Graphical view ]
PANTHERi PTHR15405. PTHR15405. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  7. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  9. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  10. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  12. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3TWH3_MOUSE
AccessioniPrimary (citable) accession number: Q3TWH3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 29, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3