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Protein
Submitted name:

Split hand/foot malformation (Ectrodactyly) type 1

Gene

Shfm1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Split hand/foot malformation (Ectrodactyly) type 1Imported
Gene namesi
Name:Shfm1Imported
ORF Names:mCG_19082Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:109238. Shfm1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000042541.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000040741.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG4764. Eukaryota.
ENOG41126I3. LUCA.
GeneTreeiENSGT00390000018216.
HOVERGENiHBG005536.
KOiK10881.
OMAiINEEWKE.

Family and domain databases

InterProiIPR007834. DSS1_SEM1.
[Graphical view]
PfamiPF05160. DSS1_SEM1. 1 hit.
[Graphical view]
SMARTiSM01385. DSS1_SEM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TV35-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEKKQPVDL GLLEEDDEFE EFPAEDWAGL DEDEDAHVWE DNWDDDNVED
60 70
DFSNQLRAEL EKHGYKMETS
Length:70
Mass (Da):8,278
Last modified:October 11, 2005 - v1
Checksum:i0E0F58D2F3D9F723
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK160432 mRNA. Translation: BAE35785.1.
AK161690 mRNA. Translation: BAE36534.1.
AK167914 mRNA. Translation: BAE39921.1.
CH466533 Genomic DNA. Translation: EDL13957.1.
RefSeqiNP_033195.1. NM_009169.2.
UniGeneiMm.2469.

Genome annotation databases

GeneIDi20422.
KEGGimmu:20422.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK160432 mRNA. Translation: BAE35785.1.
AK161690 mRNA. Translation: BAE36534.1.
AK167914 mRNA. Translation: BAE39921.1.
CH466533 Genomic DNA. Translation: EDL13957.1.
RefSeqiNP_033195.1. NM_009169.2.
UniGeneiMm.2469.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000040741.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi20422.
KEGGimmu:20422.

Organism-specific databases

CTDi7979.
MGIiMGI:109238. Shfm1.

Phylogenomic databases

eggNOGiKOG4764. Eukaryota.
ENOG41126I3. LUCA.
GeneTreeiENSGT00390000018216.
HOVERGENiHBG005536.
KOiK10881.
OMAiINEEWKE.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000042541.

Family and domain databases

InterProiIPR007834. DSS1_SEM1.
[Graphical view]
PfamiPF05160. DSS1_SEM1. 1 hit.
[Graphical view]
SMARTiSM01385. DSS1_SEM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TV35_MOUSE
AccessioniPrimary (citable) accession number: Q3TV35
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.