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Protein
Submitted name:

Uncharacterized protein

Gene

Abcd2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi465 – 472ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Abcd2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1349467 Abcd2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei57 – 79HelicalSequence analysisAdd BLAST23
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiQ3TU16
PRIDEiQ3TU16

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 301ABC transmembrane type-1InterPro annotationAdd BLAST237
Domaini432 – 658ABC transporterInterPro annotationAdd BLAST227

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0064 Eukaryota
COG4178 LUCA
HOVERGENiHBG050438

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR031239 ABCD2
IPR027417 P-loop_NTPase
PANTHERiPTHR11384:SF24 PTHR11384:SF24, 1 hit
PfamiView protein in Pfam
PF06472 ABC_membrane_2, 1 hit
PF00005 ABC_tran, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
SSF90123 SSF90123, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 1 hit
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Fragment.

Q3TU16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GHRKAKAEAY SPAENREILH CTEIICKKPA PGLNAAFFKQ LLELRKILFP
60 70 80 90 100
KLVTTETGWL CLHSVALISR TFLSIYVAGL DGKIVKSIVE KKPRTFIIKL
110 120 130 140 150
IKWLMIAIPA TFVNSAIRYL ECKLALAFRT RLVDHAYETY FANQTYYKVI
160 170 180 190 200
NMDGRLANPD QSLTEDIMMF SQSVAHLYSN LTKPILDVIL TSYTLIRTAT
210 220 230 240 250
SRGASPIGPT LLAGLVVYAT AKVLKACSPK FGSLVAEEAH RKGYLRYVHS
260 270 280 290 300
RIIANVEEIA FYRGHKVEMK QLQKCYKALA YQMNLILSKR LWYIMIEQFL
310 320 330 340 350
MKYVWSSCGL IMVAIPIITA TGFADGDLED GPKQAMVSDR TEAFTTARNL
360 370 380 390 400
LASGADAIER IMSSYKEITE LAGYTARVYN MFWVFDEVKR GIYKRTVTQE
410 420 430 440 450
PENHSKRGGN LELPLSDTLA IKGTVIDVDH GIICENVPII TPAGEVVASR
460 470 480 490 500
LNFKVEEGMH LLITGPNGCG KSSLFRILSG LWPVYEGVLY KPPPQHMFYI
510 520 530 540 550
PQRPYMSLGS LRDQVIYPDS ADDMREKGYT DQDLERILHS VHLYHIVQRE
560 570 580 590 600
GGWDAVMDWK DVLSGGEKQR MGMARMFYHK PKYALLDECT SAVSIDVEGK
610 620 630 640 650
IFQAAIGAGI SLLSITHRPS LWKYHTHLLQ FEGEGGWRFE QLDTAIRLTL
660 670 680 690
SEEKQKLESQ LAGIPKMQQR LNELCKILGE DSVLKTIQTA EKTS
Length:694
Mass (Da):78,302
Last modified:October 11, 2005 - v1
Checksum:iE8F21B2C64E3FD08
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK161027 mRNA Translation: BAE36155.1
UniGeneiMm.295456

Similar proteinsi

Entry informationi

Entry nameiQ3TU16_MOUSE
AccessioniPrimary (citable) accession number: Q3TU16
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: February 28, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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