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Protein
Submitted name:

Putative uncharacterized protein

Gene

Abcd2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Abcd2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1349467. Abcd2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei57 – 79HelicalSequence analysisAdd BLAST23
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ3TU16.
PeptideAtlasiQ3TU16.
PRIDEiQ3TU16.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000068940.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 301ABC transmembrane type-1InterPro annotationAdd BLAST237
Domaini432 – 658ABC transporterInterPro annotationAdd BLAST227

Sequence similaritiesi

Contains 1 ABC transporter domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0064. Eukaryota.
COG4178. LUCA.
HOVERGENiHBG050438.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR031239. ABCD2.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR11384:SF24. PTHR11384:SF24. 1 hit.
PfamiPF06472. ABC_membrane_2. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3TU16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GHRKAKAEAY SPAENREILH CTEIICKKPA PGLNAAFFKQ LLELRKILFP
60 70 80 90 100
KLVTTETGWL CLHSVALISR TFLSIYVAGL DGKIVKSIVE KKPRTFIIKL
110 120 130 140 150
IKWLMIAIPA TFVNSAIRYL ECKLALAFRT RLVDHAYETY FANQTYYKVI
160 170 180 190 200
NMDGRLANPD QSLTEDIMMF SQSVAHLYSN LTKPILDVIL TSYTLIRTAT
210 220 230 240 250
SRGASPIGPT LLAGLVVYAT AKVLKACSPK FGSLVAEEAH RKGYLRYVHS
260 270 280 290 300
RIIANVEEIA FYRGHKVEMK QLQKCYKALA YQMNLILSKR LWYIMIEQFL
310 320 330 340 350
MKYVWSSCGL IMVAIPIITA TGFADGDLED GPKQAMVSDR TEAFTTARNL
360 370 380 390 400
LASGADAIER IMSSYKEITE LAGYTARVYN MFWVFDEVKR GIYKRTVTQE
410 420 430 440 450
PENHSKRGGN LELPLSDTLA IKGTVIDVDH GIICENVPII TPAGEVVASR
460 470 480 490 500
LNFKVEEGMH LLITGPNGCG KSSLFRILSG LWPVYEGVLY KPPPQHMFYI
510 520 530 540 550
PQRPYMSLGS LRDQVIYPDS ADDMREKGYT DQDLERILHS VHLYHIVQRE
560 570 580 590 600
GGWDAVMDWK DVLSGGEKQR MGMARMFYHK PKYALLDECT SAVSIDVEGK
610 620 630 640 650
IFQAAIGAGI SLLSITHRPS LWKYHTHLLQ FEGEGGWRFE QLDTAIRLTL
660 670 680 690
SEEKQKLESQ LAGIPKMQQR LNELCKILGE DSVLKTIQTA EKTS
Length:694
Mass (Da):78,302
Last modified:October 11, 2005 - v1
Checksum:iE8F21B2C64E3FD08
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK161027 mRNA. Translation: BAE36155.1.
UniGeneiMm.295456.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK161027 mRNA. Translation: BAE36155.1.
UniGeneiMm.295456.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000068940.

Proteomic databases

PaxDbiQ3TU16.
PeptideAtlasiQ3TU16.
PRIDEiQ3TU16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1349467. Abcd2.

Phylogenomic databases

eggNOGiKOG0064. Eukaryota.
COG4178. LUCA.
HOVERGENiHBG050438.

Miscellaneous databases

ChiTaRSiAbcd2. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR031239. ABCD2.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR11384:SF24. PTHR11384:SF24. 1 hit.
PfamiPF06472. ABC_membrane_2. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TU16_MOUSE
AccessioniPrimary (citable) accession number: Q3TU16
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 5, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.