Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative uncharacterized protein

Gene

Lin7c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Lin7cImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1330839. Lin7c.

PTM / Processingi

Proteomic databases

PaxDbiQ3TTY6.

Expressioni

Gene expression databases

BgeeiENSMUSG00000027162.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028583.

Structurei

3D structure databases

ProteinModelPortaliQ3TTY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 61L27InterPro annotationAdd BLAST56
Domaini89 – 171PDZ (DHR)InterPro annotationAdd BLAST83

Sequence similaritiesi

Contains 1 PDZ (DHR) domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG3550. Eukaryota.
ENOG410XP5T. LUCA.
HOVERGENiHBG052329.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
InterProiIPR014775. L27_C.
IPR004172. L27_dom.
IPR001478. PDZ.
[Graphical view]
PfamiPF02828. L27. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM00569. L27. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF101288. SSF101288. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEiPS51022. L27. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3TTY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GEPVRLERDI CRAIELLEKL QRSGEVPPQK LQALQRVLQS EFCNAVREVY
60 70 80 90 100
EHVYETVDIS SSPEVRANAT AKATVAAFAA SEGHSHPRVV ELPKTEEGLG
110 120 130 140 150
FNIMGGKEQN SPIYISRIIP GGIADRHGGL KRGDQLLSVN GVSVEGEHHE
160 170 180 190
KAVELLKAAQ GKVKLVVRYT PKVLEEMESR FEKMRSAKRR QQT
Length:193
Mass (Da):21,447
Last modified:October 11, 2005 - v1
Checksum:i7D97C13C0C500073
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK161076 mRNA. Translation: BAE36186.1.
UniGeneiMm.235300.
Mm.478053.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK161076 mRNA. Translation: BAE36186.1.
UniGeneiMm.235300.
Mm.478053.

3D structure databases

ProteinModelPortaliQ3TTY6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028583.

Proteomic databases

PaxDbiQ3TTY6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1330839. Lin7c.

Phylogenomic databases

eggNOGiKOG3550. Eukaryota.
ENOG410XP5T. LUCA.
HOVERGENiHBG052329.

Miscellaneous databases

ChiTaRSiLin7c. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000027162.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
InterProiIPR014775. L27_C.
IPR004172. L27_dom.
IPR001478. PDZ.
[Graphical view]
PfamiPF02828. L27. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM00569. L27. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF101288. SSF101288. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEiPS51022. L27. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TTY6_MOUSE
AccessioniPrimary (citable) accession number: Q3TTY6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 5, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.