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Unreviewed, UniProtKB/TrEMBL Q3TTU8 (Q3TTU8_MOUSE)

Last modified January 19, 2010. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Nuclear factor of activated T-cells c2 isoform IA-deltaII-Xa EMBL ACG55605.1
Submitted name:
    Nuclear factor of activated T-cells c2 isoform IB-deltaII-Xa EMBL ACG55606.1
    Putative uncharacterized protein EMBL BAE36226.1
Gene names
Name: Nfatc2 MGI 102463
Synonyms: AI607462 MGI 2139019
OrganismMus musculus (Mouse) EMBL BAE36226.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

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Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Contains 1 RHD (Rel-like) domain.

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Sequences

Sequence LengthMass (Da)Tools
Q3TTU8-1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 021D538A7F2C8EEC

FASTA47352,311
        10         20         30         40         50         60 
MENKPLGLQI FIGTADERIL KPHAFYQVHR ITGKTVTTTS YEKIVGNTKV LEIPLEPKNN 

        70         80         90        100        110        120 
MRATIDCAGI LKLRNADIEL RKGETDIGRK NTRVRLVFRV HVPEPSGRIV SLQAASNPIE 

       130        140        150        160        170        180 
CSQRSAHELP MVERQDMDSC LVYGGQQMIL TGQNFTAESK VVFMEKTTDG QQIWEMEATV 

       190        200        210        220        230        240 
DKDKSQPNML FVEIPEYRNK HIRVPVKVNF YVINGKRKRS QPQHFTYHPV PAIKTEPSDE 

       250        260        270        280        290        300 
YEPSLICSPA HGGLGSQPYY PQHPMLAESP SCLVATMAPC QQFRSGLSSP DARYQQQSPA 

       310        320        330        340        350        360 
AALYQRSKSL SPGLLGYQQP SLLAAPLGLA DAHRSVLVHA GSQGQGQGST LPHTSSASQQ 

       370        380        390        400        410        420 
ASPVIHYSPT NQQLRGGGHQ EFQHIMYCEN FGPSSARPGP PPINQGQRLS PGAYPTVIQQ 

       430        440        450        460        470 
QTAPSQRAAK NGPSDQKEAL PTGVTVKQEQ NLDQTYLDDE LIDTHLSWIQ NIL

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References

« Hide 'large scale' references
[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL BAE36226.1.
Tissue: Head EMBL BAE36226.1.
[2]"Alternative splicing and expression of human and mouse NFAT genes."
Vihma H., Pruunsild P., Timmusk T.
Genomics 0:0-0(2008)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL ACG55605.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EU887585 mRNA. Translation: ACG55605.1.
EU887586 mRNA. Translation: ACG55606.1.
AK161174 mRNA. Translation: BAE36226.1.
IPIIPI00828243.
UniGeneMm.116802

3D structure databases

SMRQ3TTU8. Positions 1-230.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3TTU8.

Genome annotation databases

EnsemblENSMUST00000099068; ENSMUSP00000096667; ENSMUSG00000027544; Mus musculus. [Genome view]
ENSMUST00000109184; ENSMUSP00000104812; ENSMUSG00000027544; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:102463. Nfatc2.

Phylogenomic databases

HOVERGENQ3TTU8.

Gene expression databases

ArrayExpressQ3TTU8.
BgeeQ3TTU8.
GenevestigatorQ3TTU8.

Family and domain databases

InterProIPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002909. IPT_TIG_rcpt.
IPR008366. NFAT.
IPR018286. NFAT_sbgrp.
IPR008967. p53-like_TF_DNA-bd.
IPR011539. RHD.
[Graphical view]
Gene3DG3DSA:2.60.40.10. Ig-like_fold. 1 hit.
G3DSA:2.60.40.340. RHD. 1 hit.
PANTHERPTHR12533. NFAT. 1 hit.
PfamPF00554. RHD. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
PRINTSPR01789. NUCFACTORATC.
SMARTSM00429. IPT. 1 hit.
[Graphical view]
PROSITEPS50254. REL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

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Entry information

Entry nameQ3TTU8_MOUSE
AccessionPrimary (citable) accession number: Q3TTU8
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 19, 2010
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information