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Protein
Submitted name:

Putative uncharacterized protein

Gene

Syncrip

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:SyncripImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1891690. Syncrip.

PTM / Processingi

Proteomic databases

PaxDbiQ3TRV3.
PeptideAtlasiQ3TRV3.
PRIDEiQ3TRV3.

Expressioni

Gene expression databases

BgeeiENSMUSG00000032423.
GenevisibleiQ3TRV3. MM.

Structurei

3D structure databases

ProteinModelPortaliQ3TRV3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 153RRM (RNA recognition motif)InterPro annotationAdd BLAST71

Phylogenomic databases

eggNOGiKOG0117. Eukaryota.
ENOG410XTJ5. LUCA.
KOiK13160.

Family and domain databases

InterProiView protein in InterPro
IPR006535. HnRNP_R/Q_splicing_fac.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 2 hits.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 2 hits.
TIGRFAMsiTIGR01648. hnRNP-R-Q. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q3TRV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KEQILEEFSK VTEGLTDVIL YHQPDDKKKN RGFCFLEYED HKTAAQARRR
60 70 80 90 100
LMSGKVKVWG NVGTVEWADP IEDPDPEVMA KVKVLFVRNL ANTVTEEILE
110 120 130 140 150
KSFSQFGKLE RVKKLKDYAF IHFDERDGAV KAMEEMNGKD LEGENIEIVF
160 170 180 190 200
AKPPDQKRKE RKAQRQAAKN QMYDDYYYYG PPHMPPPTRG RGRGGRGGYG
210 220 230 240 250
YPPDYYGYED YYDYYGYDYH NYRGGYEDPY YGYEDFQVGA RGRGGRGARG
260 270 280 290 300
AAPSRGRGAA PPRGRAGYSQ RGGPGSARGV RGARGGAQQQ RGRGVRGARG
310 320 330 340 350
GRGGNVGGKR KADGYNQPDT KRRQTNNQNW GSQPIAQQPL QGGDHSGNYG
360
YKSENQEFYQ DTFGQQWK
Length:368
Mass (Da):41,633
Last modified:October 11, 2005 - v1
Checksum:iAA56C3D16FE97A17
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162448 mRNA. Translation: BAE36923.1.
RefSeqiNP_062640.2. NM_019666.2.
UniGeneiMm.260545.

Genome annotation databases

GeneIDi56403.
KEGGimmu:56403.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ3TRV3_MOUSE
AccessioniPrimary (citable) accession number: Q3TRV3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 5, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)