Tnrc6b

Functionⁱ

GO - Molecular functionⁱ

nucleic acid binding Source: InterPro

GO - Biological processⁱ

miRNA mediated inhibition of translation Source: InterPro

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Putative uncharacterized proteinImported
Gene namesⁱ	Name:Tnrc6bImported
Organismⁱ	Mus musculus (Mouse)Imported
Taxonomic identifierⁱ	10090 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus

Organism-specific databases

MGIⁱ	MGI:2443730. Tnrc6b.

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	Q3TRK2.
PeptideAtlas More...PeptideAtlasⁱ	Q3TRK2.

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSMUSG00000047888.
Genevisibleⁱ	Q3TRK2. MM.

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	264 – 543	TNRC6-PABC_bdgInterPro annotationAdd BLAST		280

Coiled coil

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Coiled coilⁱ	201 – 228	Sequence analysisAdd BLAST		28

Keywords - Domainⁱ

Coiled coilSequence analysis

Phylogenomic databases

eggNOGⁱ	ENOG410IET2. Eukaryota. ENOG410YDKH. LUCA.
HOVERGENⁱ	HBG062594.

Family and domain databases

Gene3Dⁱ	2.130.10.10. 1 hit.
InterProⁱ	View protein in InterPro IPR000504. RRM_dom. IPR032226. TNRC6_PABC-bd. IPR033500. TNRC6B. IPR015943. WD40/YVTN_repeat-like_dom.
PANTHERⁱ	PTHR13020:SF41. PTHR13020:SF41. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF16608. TNRC6-PABC_bdg. 1 hit.
SUPFAMⁱ	SSF54928. SSF54928. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Q3TRK2-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MKCSLKGGNN DSWMNPLAKQ FSNMGLLSQT EDNPSSKMDL SVDKKFDVDK 
        60         70         80         90        100
RTMNLGDFND IMRKDRPGFR PPNSKDLGTT DSGPYFEKGG SHGLFGNSTA 
       110        120        130        140        150
QSRGLHTPVQ PLSSSPGLRA QVPPQFISPQ VSASMLKQFP NSGLNPGLFN 
       160        170        180        190        200
VGPQLSPQQI AMLSQLPQIP QFQLACQLLL QQQQQQQQLL QNQRKISQAV 
       210        220        230        240        250
RQQQEQQLAR MVSALQQQQQ QQQQQQRQPS MKHSPSHPVG PKPHLDNMVP 
       260        270        280        290        300
NALNVGLPDL PTKGPIPGYG SGFSSGGMDY GMVGGKEAGT ESRFKQWTSM 
       310        320        330        340        350
MEGLPSVATQ EATMHKNGAI VAPGKTRGGS PYNQFDIIPG DTLGGHTGPA 
       360        370        380        390        400
GDSWLPAKSP PTNKIGSKSS NASWPPEFQP GVPWKGIQNI DPESDPYVTP 
       410        420        430        440        450
GSVLGGTTTS PIVDTDHQLL RDNTTGSNSS LNTSLPSPGA WPYSASDNSF 
       460        470        480        490        500
TNVHSTSAKF PDYKSTWSPD PIGHNPTHLS NKMWKNHISS RNTTPLTRPP 
       510        520        530        540        550
PGLTNPKPAS PWSSTAPRSV RGWGTQDSRI ASASTWSDGG SVRPSYWLVL 
       560        570        580        590        600
HNLTPQIDGS TLRTICMQHG PLLTFHLNLT QGTALIRYST KQEAAKAQTA 
       610        620        630        640        650
LHMCVLGNTT ILAEFATEDE VSRFLAQAQP PTPAATPSAP ATGWQSLETS 
       660        670        680        690        700
QNQADPVGPA LNLFGGSTGL GQWSSSAGGS SGADLAGTSL WGPPNYSSSL 
       710        720        730 
WGVPTVEDPH RMGSPAPLLP GDLLGGGSDS I

Length:731

Mass (Da):78,108

Last modified:October 11, 2005 - v1

Checksum:ⁱFE251E7695918161

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK162702 mRNA. Translation: BAE37027.1.
NCBI Reference Sequences More...RefSeqⁱ	NP_796098.3. NM_177124.4.
UniGeneⁱ	Mm.131328. Mm.412092.

Genome annotation databases

GeneIDⁱ	213988.

GeneIDⁱ

213988.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK162702 mRNA. Translation: BAE37027.1.
NCBI Reference Sequences More...RefSeqⁱ	NP_796098.3. NM_177124.4.
UniGeneⁱ	Mm.131328. Mm.412092.

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Proteomic databases

PaxDbⁱ	Q3TRK2.
PeptideAtlas More...PeptideAtlasⁱ	Q3TRK2.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

GeneIDⁱ	213988.

GeneIDⁱ

213988.

Organism-specific databases

CTDⁱ	23112.
MGIⁱ	MGI:2443730. Tnrc6b.

Phylogenomic databases

eggNOGⁱ	ENOG410IET2. Eukaryota. ENOG410YDKH. LUCA.
HOVERGENⁱ	HBG062594.

Miscellaneous databases

ChiTaRSⁱ	Tnrc6b. mouse.
SOURCEⁱ	Search...

Gene expression databases

Bgeeⁱ	ENSMUSG00000047888.
Genevisibleⁱ	Q3TRK2. MM.

Family and domain databases

Gene3Dⁱ	2.130.10.10. 1 hit.
InterProⁱ	View protein in InterPro IPR000504. RRM_dom. IPR032226. TNRC6_PABC-bd. IPR033500. TNRC6B. IPR015943. WD40/YVTN_repeat-like_dom.
PANTHERⁱ	PTHR13020:SF41. PTHR13020:SF41. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF16608. TNRC6-PABC_bdg. 1 hit.
SUPFAMⁱ	SSF54928. SSF54928. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	Q3TRK2_MOUSE
Accessionⁱ	Q3TRK2Primary (citable) accession number: Q3TRK2
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	October 11, 2005
	Last sequence update:	October 11, 2005
	Last modified:	July 5, 2017
	This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

UniProtKB - Q3TRK2 (Q3TRK2_MOUSE)

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Putative uncharacterized protein

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Organism-specific databases

PTM / Processingⁱ

Proteomic databases

Expressionⁱ

Gene expression databases

Family & Domainsⁱ

Domains and Repeats

Coiled coil

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

Entry informationⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q3TRK2 (Q3TRK2_MOUSE)

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Putative uncharacterized protein

Tnrc6b

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Coiled coil

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Expressionⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ