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Protein
Submitted name:

Putative uncharacterized protein

Gene

Tnrc6b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Tnrc6bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2443730. Tnrc6b.

PTM / Processingi

Proteomic databases

PaxDbiQ3TRK2.
PeptideAtlasiQ3TRK2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000047888.
GenevisibleiQ3TRK2. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064336.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini264 – 543TNRC6-PABC_bdgInterPro annotationAdd BLAST280

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili201 – 228Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IET2. Eukaryota.
ENOG410YDKH. LUCA.
HOVERGENiHBG062594.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR032226. TNRC6_PABC-bd.
IPR033500. TNRC6B.
[Graphical view]
PANTHERiPTHR13020:SF32. PTHR13020:SF32. 1 hit.
PfamiPF16608. TNRC6-PABC_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3TRK2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKCSLKGGNN DSWMNPLAKQ FSNMGLLSQT EDNPSSKMDL SVDKKFDVDK
60 70 80 90 100
RTMNLGDFND IMRKDRPGFR PPNSKDLGTT DSGPYFEKGG SHGLFGNSTA
110 120 130 140 150
QSRGLHTPVQ PLSSSPGLRA QVPPQFISPQ VSASMLKQFP NSGLNPGLFN
160 170 180 190 200
VGPQLSPQQI AMLSQLPQIP QFQLACQLLL QQQQQQQQLL QNQRKISQAV
210 220 230 240 250
RQQQEQQLAR MVSALQQQQQ QQQQQQRQPS MKHSPSHPVG PKPHLDNMVP
260 270 280 290 300
NALNVGLPDL PTKGPIPGYG SGFSSGGMDY GMVGGKEAGT ESRFKQWTSM
310 320 330 340 350
MEGLPSVATQ EATMHKNGAI VAPGKTRGGS PYNQFDIIPG DTLGGHTGPA
360 370 380 390 400
GDSWLPAKSP PTNKIGSKSS NASWPPEFQP GVPWKGIQNI DPESDPYVTP
410 420 430 440 450
GSVLGGTTTS PIVDTDHQLL RDNTTGSNSS LNTSLPSPGA WPYSASDNSF
460 470 480 490 500
TNVHSTSAKF PDYKSTWSPD PIGHNPTHLS NKMWKNHISS RNTTPLTRPP
510 520 530 540 550
PGLTNPKPAS PWSSTAPRSV RGWGTQDSRI ASASTWSDGG SVRPSYWLVL
560 570 580 590 600
HNLTPQIDGS TLRTICMQHG PLLTFHLNLT QGTALIRYST KQEAAKAQTA
610 620 630 640 650
LHMCVLGNTT ILAEFATEDE VSRFLAQAQP PTPAATPSAP ATGWQSLETS
660 670 680 690 700
QNQADPVGPA LNLFGGSTGL GQWSSSAGGS SGADLAGTSL WGPPNYSSSL
710 720 730
WGVPTVEDPH RMGSPAPLLP GDLLGGGSDS I
Length:731
Mass (Da):78,108
Last modified:October 11, 2005 - v1
Checksum:iFE251E7695918161
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162702 mRNA. Translation: BAE37027.1.
RefSeqiNP_796098.3. NM_177124.4.
UniGeneiMm.131328.
Mm.412092.

Genome annotation databases

GeneIDi213988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162702 mRNA. Translation: BAE37027.1.
RefSeqiNP_796098.3. NM_177124.4.
UniGeneiMm.131328.
Mm.412092.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064336.

Proteomic databases

PaxDbiQ3TRK2.
PeptideAtlasiQ3TRK2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi213988.

Organism-specific databases

CTDi23112.
MGIiMGI:2443730. Tnrc6b.

Phylogenomic databases

eggNOGiENOG410IET2. Eukaryota.
ENOG410YDKH. LUCA.
HOVERGENiHBG062594.

Miscellaneous databases

ChiTaRSiTnrc6b. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000047888.
GenevisibleiQ3TRK2. MM.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR032226. TNRC6_PABC-bd.
IPR033500. TNRC6B.
[Graphical view]
PANTHERiPTHR13020:SF32. PTHR13020:SF32. 1 hit.
PfamiPF16608. TNRC6-PABC_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TRK2_MOUSE
AccessioniPrimary (citable) accession number: Q3TRK2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 5, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.