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Protein
Submitted name:

Putative uncharacterized protein

Gene

Eif3a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Eif3aImported
Synonyms:Eif3s10Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:95301. Eif3a.

PTM / Processingi

Proteomic databases

PaxDbiQ3TRH1.

Expressioni

Gene expression databases

BgeeiQ3TRH1.
GenevisibleiQ3TRH1. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025955.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili30 – 6435Sequence analysisAdd
BLAST
Coiled coili132 – 241110Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2072. Eukaryota.
ENOG410XQ37. LUCA.
KOiK03254.

Sequencei

Sequence statusi: Fragment.

Q3TRH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ERLEQIKKTE LGAKAFKDID IEDLEELDPD FIMAKQVEQL EKEKKELQER
60 70 80 90 100
LKNQEKKIDY FERAKRLEEI PLIKSAYEEQ RVKDMDLWEQ QEEERITTMQ
110 120 130 140 150
LEREKALEHK NRMSRMLEDR DLFVMRLKAA RQSVYEEKLK QFEERLAEER
160 170 180 190 200
HSRLEDRKRQ RKEERKITYY REKEEEEQRR AEEQMLKERE ERERAERAKR
210 220 230 240 250
EEELREYQER VKKLEEVERK KRQRELEIEE RERRREEERR LGDDPLSRKD
260 270 280 290 300
SRWGDRDSEG TWRKGPEADS EWRRGPPEKE WRRETRDDER PHRRDEDRLR
310 320 330 340 350
RLGGDDEERE SSLRPDDDRI PRRGLDDDRG PRRGPDEDRF SRRGTDDDRP
360 370 380 390 400
SWRNADDDRP PRRIGDDDRG SWRHTDDDRP PRRGLDDERG SWRTADEDRG
410 420 430 440 450
PRRGMDDDRG PRRGGADDER SSWRNADDDR GPRRGMDDDR GPRRGLDDDR
460 470 480 490 500
GPWRNAAEDR ISRRGADDDR GPWRNMDDDR VPRRGDDARP GPWRPFVKPG

GW
Length:502
Mass (Da):61,321
Last modified:October 11, 2005 - v1
Checksum:iE9EE78661F7E61CE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei502 – 5021Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162784 mRNA. Translation: BAE37058.1.
RefSeqiNP_034253.3. NM_010123.3.
UniGeneiMm.2238.
Mm.482533.

Genome annotation databases

GeneIDi13669.
KEGGimmu:13669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162784 mRNA. Translation: BAE37058.1.
RefSeqiNP_034253.3. NM_010123.3.
UniGeneiMm.2238.
Mm.482533.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025955.

Proteomic databases

PaxDbiQ3TRH1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi13669.
KEGGimmu:13669.

Organism-specific databases

CTDi8661.
MGIiMGI:95301. Eif3a.

Phylogenomic databases

eggNOGiKOG2072. Eukaryota.
ENOG410XQ37. LUCA.
KOiK03254.

Miscellaneous databases

ChiTaRSiEif3a. mouse.
NextBioi284428.
SOURCEiSearch...

Gene expression databases

BgeeiQ3TRH1.
GenevisibleiQ3TRH1. MM.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.

Entry informationi

Entry nameiQ3TRH1_MOUSE
AccessioniPrimary (citable) accession number: Q3TRH1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 16, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.