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Protein
Submitted name:

Putative uncharacterized protein

Gene

Map2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. cytoskeletal regulatory protein binding Source: MGI
  2. dystroglycan binding Source: MGI
  3. microtubule binding Source: MGI

GO - Biological processi

  1. axonogenesis Source: MGI
  2. cellular response to organic substance Source: MGI
  3. dendrite development Source: MGI
  4. microtubule bundle formation Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Map2Imported
Synonyms:Mtap2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:97175. Map2.

Subcellular locationi

GO - Cellular componenti

  1. CA3 pyramidal cell dendrite Source: MGI
  2. cell body Source: MGI
  3. cytoplasm Source: MGI
  4. dendrite Source: MGI
  5. dendritic shaft Source: MGI
  6. intracellular Source: MGI
  7. microtubule associated complex Source: MGI
  8. neuronal cell body Source: MGI
  9. neuronal postsynaptic density Source: MGI
  10. neuron projection Source: MGI
  11. nuclear periphery Source: MGI
  12. postsynaptic density Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiQ3TRF8.
ExpressionAtlasiQ3TRF8. baseline and differential.
GenevestigatoriQ3TRF8.

Family & Domainsi

Family and domain databases

InterProiIPR027324. MAP2/MAP4/Tau.
[Graphical view]
PANTHERiPTHR11501. PTHR11501. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q3TRF8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
GTYSDTKENG INGELTSADR ETAEEVSARI VQVVTAEAVA VLKGEQEKEA
60 70 80 90 100
QHKDQPAALP LAEETANLPP SPPPSPASEQ TATVEEDLLT ASKMEFPEQE
110 120 130 140 150
KFPSSFAEPL DKGEMEFKMP SKPGEDFEHA ALVPDTSKTP QDKKDLQGME
160 170 180 190 200
GEKLPPVPFA QTFGTNLEDR KQSTEPSIVM PSIGLSAEPP APKEPKDWFI
210 220 230 240 250
EMPTESKKDE WGLAAPISPG PLTPMREKDV LEDIPRWEGK QFDSPMPSPF
260
HGGSFTLPLD T
Length:261
Mass (Da):28,464
Last modified:October 11, 2005 - v1
Checksum:i9DE8EBAA97EF8CF6
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei261 – 2611Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162828 mRNA. Translation: BAE37072.1.
UniGeneiMm.256966.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK162828 mRNA. Translation: BAE37072.1.
UniGeneiMm.256966.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:97175. Map2.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ3TRF8.
ExpressionAtlasiQ3TRF8. baseline and differential.
GenevestigatoriQ3TRF8.

Family and domain databases

InterProiIPR027324. MAP2/MAP4/Tau.
[Graphical view]
PANTHERiPTHR11501. PTHR11501. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.

Entry informationi

Entry nameiQ3TRF8_MOUSE
AccessioniPrimary (citable) accession number: Q3TRF8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: February 4, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.