Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q3TRF8 (Q3TRF8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Map2 MGI 97175
Synonyms:Mtap2 MGI 97175
OrganismMus musculus (Mouse) EMBL BAE37072.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length261 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processaxonogenesis

Inferred from mutant phenotype PubMed 11891784. Source: MGI

cellular response to organic substance

Inferred from direct assay PubMed 18497889. Source: MGI

dendrite development

Inferred from mutant phenotype PubMed 11581286. Source: MGI

microtubule bundle formation

Inferred from mutant phenotype PubMed 11581286. Source: MGI

   Cellular_componentcell body

Inferred from direct assay PubMed 12074840PubMed 15255972. Source: MGI

cytoplasm

Inferred from direct assay PubMed 15656993. Source: MGI

dendrite

Inferred from direct assay PubMed 11834298PubMed 12074840PubMed 15255972PubMed 15834957PubMed 16980967PubMed 19208628PubMed 23861879PubMed 24035762PubMed 3147150. Source: MGI

dendritic shaft

Inferred from direct assay PubMed 15996550. Source: MGI

intracellular

Inferred from direct assay PubMed 16892058PubMed 18268009. Source: MGI

microtubule associated complex

Traceable author statement PubMed 11581286. Source: MGI

neuron projection

Inferred from direct assay PubMed 18359573. Source: MGI

neuronal cell body

Inferred from direct assay PubMed 15964665PubMed 18359573PubMed 19646951. Source: MGI

nuclear periphery

Inferred from direct assay PubMed 11834298. Source: MGI

   Molecular_functioncytoskeletal regulatory protein binding

Traceable author statement PubMed 11581286. Source: MGI

microtubule binding

Inferred from direct assay PubMed 17360631. Source: MGI

protein binding

Inferred from physical interaction PubMed 17360631. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE37072.1
Non-terminal residue2611 EMBL BAE37072.1

Sequences

Sequence LengthMass (Da)Tools
Q3TRF8 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 9DE8EBAA97EF8CF6

FASTA26128,464
        10         20         30         40         50         60 
GTYSDTKENG INGELTSADR ETAEEVSARI VQVVTAEAVA VLKGEQEKEA QHKDQPAALP 

        70         80         90        100        110        120 
LAEETANLPP SPPPSPASEQ TATVEEDLLT ASKMEFPEQE KFPSSFAEPL DKGEMEFKMP 

       130        140        150        160        170        180 
SKPGEDFEHA ALVPDTSKTP QDKKDLQGME GEKLPPVPFA QTFGTNLEDR KQSTEPSIVM 

       190        200        210        220        230        240 
PSIGLSAEPP APKEPKDWFI EMPTESKKDE WGLAAPISPG PLTPMREKDV LEDIPRWEGK 

       250        260 
QFDSPMPSPF HGGSFTLPLD T 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37072.1.
Tissue: Hypothalamus EMBL BAE37072.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK162828 mRNA. Translation: BAE37072.1.
UniGeneMm.256966.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:97175. Map2.

Phylogenomic databases

InParanoidQ3TRF8.

Gene expression databases

ArrayExpressQ3TRF8.
BgeeQ3TRF8.
GenevestigatorQ3TRF8.

Family and domain databases

InterProIPR027324. MAP2/MAP4/Tau.
[Graphical view]
PANTHERPTHR11501. PTHR11501. 1 hit.
ProtoNetSearch...

Other

ChiTaRSMtap2. mouse.
SOURCESearch...

Entry information

Entry nameQ3TRF8_MOUSE
AccessionPrimary (citable) accession number: Q3TRF8
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)