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Q3TQJ2 (Q3TQJ2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Galt MGI 95638
OrganismMus musculus (Mouse) EMBL BAE37390.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q3TQJ2 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: B573233B8A449485

FASTA20323,578
        10         20         30         40         50         60 
MMGCSNPHPH CQVWASSFLP DIAQREERSQ QTYHSQHGKP LLLEYGHQEL LRKERLVLTS 

        70         80         90        100        110        120 
EHWIVLVPFW AVWPFQTLLL PRRHVRRLPE LNPAERDDLA SIMKKLLTKY DNLFETSFPY 

       130        140        150        160        170        180 
SMGWHGAPTG LKTGATCDHW QLHAHYYPPL LRSATVRKFM VGYEMLAQAQ RDLTPEQAAE 

       190        200 
RLRALPEVHY CLAQKDKETA AIA 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE37390.1.
Tissue: Corpora quadrigemina EMBL BAE37390.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK163544 mRNA. Translation: BAE37390.1.
RefSeqXP_006537681.1. XM_006537618.1.
UniGeneMm.439669.

3D structure databases

ProteinModelPortalQ3TQJ2.
SMRQ3TQJ2. Positions 2-190.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID14430.

Organism-specific databases

MGIMGI:95638. Galt.

Phylogenomic databases

HOVERGENHBG051700.
InParanoidQ3TQJ2.

Gene expression databases

ArrayExpressQ3TQJ2.
BgeeQ3TQJ2.
GenevestigatorQ3TQJ2.

Family and domain databases

Gene3D3.30.428.10. 2 hits.
InterProIPR001937. GalP_UDPtransf1.
IPR005850. GalP_Utransf_C.
IPR005849. GalP_Utransf_N.
IPR011146. HIT-like.
[Graphical view]
PANTHERPTHR11943. PTHR11943. 1 hit.
PfamPF02744. GalP_UDP_tr_C. 1 hit.
PF01087. GalP_UDP_transf. 1 hit.
[Graphical view]
SUPFAMSSF54197. SSF54197. 2 hits.
TIGRFAMsTIGR00209. galT_1. 1 hit.
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ3TQJ2_MOUSE
AccessionPrimary (citable) accession number: Q3TQJ2
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 19, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)