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Q3TNE7 (Q3TNE7_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Dnajc13 MGI 2676368
OrganismMus musculus (Mouse) EMBL BAE38142.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length479 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE38142.1
Non-terminal residue4791 EMBL BAE38142.1

Sequences

Sequence LengthMass (Da)Tools
Q3TNE7 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: D8F8BFF0452B6E2C

FASTA47953,967
        10         20         30         40         50         60 
RFSARKPGGR WRRPGRASER QREERRGGGR GAGTRGDRPR RGKGKREGTG PAAPPSYSRR 

        70         80         90        100        110        120 
GAGGGRSSGW SASSLLRRFQ HKMNIIRENK DLACFYTTKH SWRGKYKRVF SVGTHAVTTY 

       130        140        150        160        170        180 
NPNTLEVTNQ WPYGDICSIS PVGKGQGTEF NLTFRKGSGK KSETLKFSTE HRTELLTEAL 

       190        200        210        220        230        240 
RFRTDFAEGK ITGRRYNWYK HHWSDAKKPV VLEVTPGGFD QINPVTNRVL CSYDYRNIEG 

       250        260        270        280        290        300 
FVDLSDYQGG FCILYGGFSR LHLFSSEQRE EIIKSAIEHA GNYIGISLRI RKEPLEFEQY 

       310        320        330        340        350        360 
LNLRFGKYST DESITSLAEF VVQKISPRHS EPVKRVLAVT ETCLVERDPA TYNIATLKPL 

       370        380        390        400        410        420 
GEVFALVCDS ENPQLFTIEF IKGQVRKYSS TERDSLLASL LDGVRASGNR DVCVKMAPTH 

       430        440        450        460        470 
KGQRWGLLSM PIDEEVESLH LRFLAAPPNG NFADAVFRFN ANISYSGVLH AVTQDGLFS 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE38142.1.
Tissue: Spleen EMBL BAE38142.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK165345 mRNA. Translation: BAE38142.1.
RefSeqNP_001156498.1. NM_001163026.1.
UniGeneMm.217256.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ3TNE7.
PRIDEQ3TNE7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID235567.
KEGGmmu:235567.

Organism-specific databases

CTD23317.
MGIMGI:2676368. Dnajc13.

Phylogenomic databases

eggNOGNOG299042.
KOK09533.

Gene expression databases

GenevestigatorQ3TNE7.

Family and domain databases

ProtoNetSearch...

Other

NextBio382751.
SOURCESearch...

Entry information

Entry nameQ3TNE7_MOUSE
AccessionPrimary (citable) accession number: Q3TNE7
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 22, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)