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Protein
Submitted name:

Putative uncharacterized protein

Gene

Slc27a1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Slc27a1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1347098. Slc27a1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ3TN26.
PRIDEiQ3TN26.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034267.

Structurei

3D structure databases

ProteinModelPortaliQ3TN26.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini65 – 498434AMP-bindingInterPro annotationAdd
BLAST
Domaini506 – 58176AMP-binding_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1179. Eukaryota.
ENOG410XQ8T. LUCA.
HOVERGENiHBG005642.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
IPR030308. FATP1.
[Graphical view]
PANTHERiPTHR24096:SF148. PTHR24096:SF148. 1 hit.
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TN26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLASRYQPL KDPLLDLCCP GAPEVTGSSG QWPCLCLCSG LSVLIRVRLE
60 70 80 90 100
LRRHRRAGDT IPCIFQAVAR RQPERLALVD ASSGICWTFA QLDTYSNAVA
110 120 130 140 150
NLFRQLGFAP GDVVAVFLEG RPEFVGLWLG LAKAGVVAAL LNVNLRREPL
160 170 180 190 200
AFCLGTSAAK ALIYGGEMAA AVAEVSEQLG KSLLKFCSGD LGPESILPDT
210 220 230 240 250
QLLDPMLAEA PTTPLAQAPG KGMDDRLFYI YTSGTTGLPK AAIVVHSRYY
260 270 280 290 300
RIAAFGHHSY SMRAADVLYD CLPLYHSAGN IMGVGQCVIY GLTVVLRKKF
310 320 330 340 350
SASRFWDDCV KYNCTVVQYI GEICRYLLRQ PVRDVEQRHR VRLAVGNGLR
360 370 380 390 400
PAIWEEFTQR FGVPQIGEFY GATECNCSIA NMDGKVGSCG FNSRILTHVY
410 420 430 440 450
PIRLVKVNED TMEPLRDSEG LCIPCQPGEP GLLVGQINQQ DPLRRFDGYV
460 470 480 490 500
SDSATNKKIA HSVFRKGDSA YLSGDVLVMD ELGYMYFRDR SGDTFRWRGE
510 520 530 540 550
NVSTTEVEAV LSRLLGQTDV AVYGVAVPGV EGKAGMAAIA DPHSQLDPNS
560 570 580 590 600
MYQELQKVLA SYARPIFLRL LPQVDTTGTF KIQKTRLQRE GFDPRQTSDR
610 620
LFFLDLKQGR YLPLDERVHA RICAGDFSL
Length:629
Mass (Da):69,410
Last modified:October 11, 2005 - v1
Checksum:i886F316F9BE58396
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165571 mRNA. Translation: BAE38263.1.
UniGeneiMm.38165.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165571 mRNA. Translation: BAE38263.1.
UniGeneiMm.38165.

3D structure databases

ProteinModelPortaliQ3TN26.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034267.

Proteomic databases

PaxDbiQ3TN26.
PRIDEiQ3TN26.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1347098. Slc27a1.

Phylogenomic databases

eggNOGiKOG1179. Eukaryota.
ENOG410XQ8T. LUCA.
HOVERGENiHBG005642.

Miscellaneous databases

ChiTaRSiSlc27a1. mouse.
SOURCEiSearch...

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
IPR030308. FATP1.
[Graphical view]
PANTHERiPTHR24096:SF148. PTHR24096:SF148. 1 hit.
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.

Entry informationi

Entry nameiQ3TN26_MOUSE
AccessioniPrimary (citable) accession number: Q3TN26
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 16, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.