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Protein
Submitted name:

Putative uncharacterized protein

Gene

Taf15

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Taf15Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1917689. Taf15.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ3TLE4.
PeptideAtlasiQ3TLE4.
PRIDEiQ3TLE4.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021018.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini232 – 31887RRM (RNA recognition motif)InterPro annotationAdd
BLAST
Domaini352 – 38332RanBP2-typeInterPro annotationAdd
BLAST

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiENOG410IP57. Eukaryota.
ENOG4111P4G. LUCA.
HOVERGENiHBG005755.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TLE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDSGSYSQS GGEQQSYSSY GNQGSQGYGQ TPQGYSGYGQ TTDSSYGQNY
60 70 80 90 100
GGYSGYGQNQ SGYSQSYGSY ENQKQSSYGQ QSYNNQGQQN TESSGGQGGR
110 120 130 140 150
APSYGQSDYG QQDSYDQQSG YDQHQGSYDE QSNYQQHDSY NQNQQSYHSQ
160 170 180 190 200
RENYSHHTQD DRRDVSRYGE DNRGYGGSQG GGRGRGGYDK DGRGPMTGSS
210 220 230 240 250
GGDRGGFKNF GGHRDYGPRP DADSESDNSD NNTIFVQGLG EGVSTDQVGE
260 270 280 290 300
FFKQIGIIKT NKKTGKPMIN LYTDKDTGKP KGEATVSFDD PPSAKAAIDW
310 320 330 340 350
FDGKEFHGNI IKVSFATRRP EFMRGGGSGG GRRGRGGYRG RGGFQGRGGD
360 370 380 390 400
PKNGDWVCPN PSCGNMNFAR RNSCNQCNEP RPEDSRPSGG DFRGRGYGGE
410 420 430 440 450
RGYRGRGGRG GDRGGYGGDR SGGGYGGDRS GGGYGGDRGG SYGGDRGGYG
460 470 480 490 500
GDRGGSYGGD RGGYGGDRGG YGGDRGGYGG DRGGYGGDSG GYGGDRGGYG
510
GKMGGRNDYR NDQRNRPY
Length:518
Mass (Da):54,960
Last modified:October 11, 2005 - v1
Checksum:i1E7D7C58E8F967A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK166550 mRNA. Translation: BAE38848.1.
UniGeneiMm.181050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK166550 mRNA. Translation: BAE38848.1.
UniGeneiMm.181050.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021018.

Proteomic databases

PaxDbiQ3TLE4.
PeptideAtlasiQ3TLE4.
PRIDEiQ3TLE4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1917689. Taf15.

Phylogenomic databases

eggNOGiENOG410IP57. Eukaryota.
ENOG4111P4G. LUCA.
HOVERGENiHBG005755.

Miscellaneous databases

ChiTaRSiTaf15. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3TLE4_MOUSE
AccessioniPrimary (citable) accession number: Q3TLE4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 6, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.