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Protein
Submitted name:

F-box only protein 15

Gene

Fbxo15

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
F-box only protein 15Imported
Gene namesi
Name:Fbxo15Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 18

Organism-specific databases

MGIiMGI:1354755. Fbxo15.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000045925.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 8647F-boxInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 F-box domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IERD. Eukaryota.
ENOG410YHRX. LUCA.
GeneTreeiENSGT00390000017498.
HOGENOMiHOG000247014.
HOVERGENiHBG051566.
KOiK10298.
OMAiYHLANDN.
OrthoDBiEOG7V4B18.
TreeFamiTF332483.

Family and domain databases

InterProiIPR001810. F-box_dom.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TJW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEESELEIFR SKFVRGSSVT KQHAWRNQHS EKRCSSSISS ISLDRMPSEI
60 70 80 90 100
LVKILSYLDA VTLVCIGCVS RRFYHLADDN LIWVRKYAAA FRSKRSRWKA
110 120 130 140 150
TSVEETATSL SLLSVWDKED GYWKKEYITK QISSVKAALT NSLSPVKRRT
160 170 180 190 200
SLPSKTKESL RISGLGWTII LREASGKEHI MQHSNLSVND NSVTVFWHDK
210 220 230 240 250
NWPHVDTLST LDLYGATPIF MEQYKGPNTS CPRWLSLIEK YDLSNLRKSA
260 270 280 290 300
MIGCDRHVRV FCVNPGLLVG LWQENGGLAF VMANIHSHGL FERSIMGSDT
310 320 330 340 350
IPYTLPPDTT FVDNYPDSMT FYGDKGFQLH IDIHGSKTYF LCSTFHNLFC
360 370 380 390 400
RRAGINNGYV KFLMINLKNN REHLPLVGKV GLEWRTDCLN GRIESCIVVD
410 420 430 440 450
MTLLDEDKKP IWYVSSPVCL RSACLPDFPQ PAYSFEYMDS VGGVCADLGW
460 470
FENTDEYFIV RLDIYLSVAK LQQWFGRQ
Length:478
Mass (Da):54,695
Last modified:October 11, 2005 - v1
Checksum:iCA28D7A070BE86D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC128672 Genomic DNA. No translation available.
AC134545 Genomic DNA. No translation available.
AK163224 mRNA. Translation: BAE37242.1.
AK167270 mRNA. Translation: BAE39383.1.
RefSeqiNP_056613.1. NM_015798.3.
XP_011245388.1. XM_011247086.1.
UniGeneiMm.28369.

Genome annotation databases

EnsembliENSMUST00000037718; ENSMUSP00000045925; ENSMUSG00000034391.
GeneIDi50764.
KEGGimmu:50764.
UCSCiuc008fux.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC128672 Genomic DNA. No translation available.
AC134545 Genomic DNA. No translation available.
AK163224 mRNA. Translation: BAE37242.1.
AK167270 mRNA. Translation: BAE39383.1.
RefSeqiNP_056613.1. NM_015798.3.
XP_011245388.1. XM_011247086.1.
UniGeneiMm.28369.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000045925.

Protocols and materials databases

DNASUi50764.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000037718; ENSMUSP00000045925; ENSMUSG00000034391.
GeneIDi50764.
KEGGimmu:50764.
UCSCiuc008fux.1. mouse.

Organism-specific databases

CTDi201456.
MGIiMGI:1354755. Fbxo15.

Phylogenomic databases

eggNOGiENOG410IERD. Eukaryota.
ENOG410YHRX. LUCA.
GeneTreeiENSGT00390000017498.
HOGENOMiHOG000247014.
HOVERGENiHBG051566.
KOiK10298.
OMAiYHLANDN.
OrthoDBiEOG7V4B18.
TreeFamiTF332483.

Miscellaneous databases

ChiTaRSiFbxo15. mouse.
NextBioi307663.
SOURCEiSearch...

Family and domain databases

InterProiIPR001810. F-box_dom.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3TJW2_MOUSE
AccessioniPrimary (citable) accession number: Q3TJW2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 11, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.