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Protein
Submitted name:

Platelet-activating factor acetylhydrolase, isoform 1b, alpha1 subunit, isoform CRA_a

Gene

Pafah1b3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Platelet-activating factor acetylhydrolase, isoform 1b, alpha1 subunit, isoform CRA_aImported
Gene namesi
Name:Pafah1b3Imported
ORF Names:mCG_7263Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:108414. Pafah1b3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000005447.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005583.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini44 – 202SGNH_hydroInterPro annotationAdd BLAST159

Phylogenomic databases

eggNOGiKOG1388. Eukaryota.
ENOG410XRW4. LUCA.
HOVERGENiHBG053477.
KOiK16795.
OMAiATQHVLW.
OrthoDBiEOG091G0OII.

Family and domain databases

Gene3Di3.40.50.1110. 1 hit.
InterProiIPR013830. SGNH_hydro.
[Graphical view]
PfamiPF13472. Lipase_GDSL_2. 1 hit.
[Graphical view]
SUPFAMiSSF52266. SSF52266. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3TJC2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGEGENPAS KPTPVQDVQG DGRWMSLHHR FVADSKDKEP EVVFIGDSLV
60 70 80 90 100
QLMHQCEIWR ELFSPLHALN FGIGGDSTQH VLWRLENGEL EHIRPKIVVV
110 120 130 140 150
WVGTNNHSHT AEQVTGGIKA IVQLVNKLQP QARVVVLGLL PRGQHPNPLR
160 170 180 190 200
EKNRQVNELV RAALAGYPRA HFLDADPGFV HSDGTISHHD MYDYLHLSRL
210 220 230
GYTPVCRALH SLLLRLLAQD QGQGIPLPET AS
Length:232
Mass (Da):25,853
Last modified:October 11, 2005 - v1
Checksum:i5D3C63E2A611670B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK154547 mRNA. Translation: BAE32671.1.
AK167496 mRNA. Translation: BAE39573.1.
CH466593 Genomic DNA. Translation: EDL24278.1.
RefSeqiNP_032802.1. NM_008776.2.
XP_017177515.1. XM_017322026.1.
XP_017177516.1. XM_017322027.1.
UniGeneiMm.597.

Genome annotation databases

GeneIDi18476.
KEGGimmu:18476.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK154547 mRNA. Translation: BAE32671.1.
AK167496 mRNA. Translation: BAE39573.1.
CH466593 Genomic DNA. Translation: EDL24278.1.
RefSeqiNP_032802.1. NM_008776.2.
XP_017177515.1. XM_017322026.1.
XP_017177516.1. XM_017322027.1.
UniGeneiMm.597.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005583.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18476.
KEGGimmu:18476.

Organism-specific databases

CTDi5050.
MGIiMGI:108414. Pafah1b3.

Phylogenomic databases

eggNOGiKOG1388. Eukaryota.
ENOG410XRW4. LUCA.
HOVERGENiHBG053477.
KOiK16795.
OMAiATQHVLW.
OrthoDBiEOG091G0OII.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000005447.

Family and domain databases

Gene3Di3.40.50.1110. 1 hit.
InterProiIPR013830. SGNH_hydro.
[Graphical view]
PfamiPF13472. Lipase_GDSL_2. 1 hit.
[Graphical view]
SUPFAMiSSF52266. SSF52266. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TJC2_MOUSE
AccessioniPrimary (citable) accession number: Q3TJC2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.