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Q3THE1

- Q3THE1_MOUSE

UniProt

Q3THE1 - Q3THE1_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Rpl5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. 5S rRNA binding Source: InterPro
    2. protein binding Source: MGI
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosomal large subunit biogenesis Source: Ensembl
    2. rRNA processing Source: Ensembl
    3. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Rpl5Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:102854. Rpl5.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: Ensembl
    2. nucleus Source: Ensembl
    3. ribonucleoprotein complex Source: MGI

    Expressioni

    Gene expression databases

    ArrayExpressiQ3THE1.
    BgeeiQ3THE1.
    GenevestigatoriQ3THE1.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG009347.
    InParanoidiQ3THE1.

    Family and domain databases

    InterProiIPR005485. Rbsml_L5_euk/L18_arc.
    IPR025607. Rbsml_L5e/L18P_C.
    [Graphical view]
    PANTHERiPTHR23410. PTHR23410. 1 hit.
    PfamiPF14204. Ribosomal_L18_c. 1 hit.
    [Graphical view]
    PRINTSiPR00058. RIBOSOMALL5.

    Sequencei

    Sequence statusi: Fragment.

    Q3THE1-1 [UniParc]FASTAAdd to Basket

    « Hide

    GALKGAVDGG LSIPHSTKRF PGYDSESKEF NAEVHRKHIM GQNVADYMRY    50
    LMEEDEDAYK KQFSQYIKNN VTPDMMEEMY KKAHAAIREN PVYEKKPKRE 100
    VKKKRWNRPK MSLAQKKDRV AQKKASFLRA QERAAES 137
    Length:137
    Mass (Da):15,996
    Last modified:October 11, 2005 - v1
    Checksum:i8E90FBA157A58730
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK168317 mRNA. Translation: BAE40256.1.
    UniGeneiMm.277897.
    Mm.426204.
    Mm.491107.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK168317 mRNA. Translation: BAE40256.1 .
    UniGenei Mm.277897.
    Mm.426204.
    Mm.491107.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:102854. Rpl5.

    Phylogenomic databases

    HOVERGENi HBG009347.
    InParanoidi Q3THE1.

    Miscellaneous databases

    ChiTaRSi RPL5. mouse.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q3THE1.
    Bgeei Q3THE1.
    Genevestigatori Q3THE1.

    Family and domain databases

    InterProi IPR005485. Rbsml_L5_euk/L18_arc.
    IPR025607. Rbsml_L5e/L18P_C.
    [Graphical view ]
    PANTHERi PTHR23410. PTHR23410. 1 hit.
    Pfami PF14204. Ribosomal_L18_c. 1 hit.
    [Graphical view ]
    PRINTSi PR00058. RIBOSOMALL5.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB/CImported.

    Entry informationi

    Entry nameiQ3THE1_MOUSE
    AccessioniPrimary (citable) accession number: Q3THE1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)