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Q3THE1

- Q3THE1_MOUSE

UniProt

Q3THE1 - Q3THE1_MOUSE

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Protein
Submitted name:

Putative uncharacterized protein

Gene

Rpl5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. 5S rRNA binding Source: InterPro
  2. poly(A) RNA binding Source: Ensembl
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. ribosomal large subunit biogenesis Source: Ensembl
  2. rRNA processing Source: Ensembl
  3. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Rpl5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:102854. Rpl5.

Subcellular locationi

GO - Cellular componenti

  1. cytosolic large ribosomal subunit Source: Ensembl
  2. extracellular vesicular exosome Source: Ensembl
  3. membrane Source: Ensembl
  4. nucleolus Source: Ensembl
  5. ribonucleoprotein complex Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiQ3THE1.
ExpressionAtlasiQ3THE1. baseline and differential.
GenevestigatoriQ3THE1.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG009347.

Family and domain databases

InterProiIPR005485. Rbsml_L5_euk/L18_arc.
IPR025607. Rbsml_L5e/L18P_C.
[Graphical view]
PANTHERiPTHR23410. PTHR23410. 1 hit.
PfamiPF14204. Ribosomal_L18_c. 1 hit.
[Graphical view]
PRINTSiPR00058. RIBOSOMALL5.

Sequencei

Sequence statusi: Fragment.

Q3THE1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
GALKGAVDGG LSIPHSTKRF PGYDSESKEF NAEVHRKHIM GQNVADYMRY
60 70 80 90 100
LMEEDEDAYK KQFSQYIKNN VTPDMMEEMY KKAHAAIREN PVYEKKPKRE
110 120 130
VKKKRWNRPK MSLAQKKDRV AQKKASFLRA QERAAES
Length:137
Mass (Da):15,996
Last modified:October 11, 2005 - v1
Checksum:i8E90FBA157A58730
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK168317 mRNA. Translation: BAE40256.1.
UniGeneiMm.277897.
Mm.426204.
Mm.491107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK168317 mRNA. Translation: BAE40256.1 .
UniGenei Mm.277897.
Mm.426204.
Mm.491107.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:102854. Rpl5.

Phylogenomic databases

HOVERGENi HBG009347.

Miscellaneous databases

ChiTaRSi Rpl5. mouse.
SOURCEi Search...

Gene expression databases

Bgeei Q3THE1.
ExpressionAtlasi Q3THE1. baseline and differential.
Genevestigatori Q3THE1.

Family and domain databases

InterProi IPR005485. Rbsml_L5_euk/L18_arc.
IPR025607. Rbsml_L5e/L18P_C.
[Graphical view ]
PANTHERi PTHR23410. PTHR23410. 1 hit.
Pfami PF14204. Ribosomal_L18_c. 1 hit.
[Graphical view ]
PRINTSi PR00058. RIBOSOMALL5.
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/CImported.

Entry informationi

Entry nameiQ3THE1_MOUSE
AccessioniPrimary (citable) accession number: Q3THE1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 26, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)