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Protein
Submitted name:

Ataxin-2-like protein

Gene

Atxn2l

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ataxin-2-like proteinImported
Gene namesi
Name:Atxn2lImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:2446242. Atxn2l.

Expressioni

Gene expression databases

BgeeiENSMUSG00000032637.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035415.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini176 – 24570LsmADInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2375. Eukaryota.
COG5180. LUCA.
GeneTreeiENSGT00530000063565.
HOVERGENiHBG050623.

Family and domain databases

InterProiIPR009818. Ataxin-2_C.
IPR009604. LsmAD_domain.
IPR025852. SM_dom_ATX.
[Graphical view]
PfamiPF06741. LsmAD. 1 hit.
PF07145. PAM2. 1 hit.
PF14438. SM-ATX. 1 hit.
[Graphical view]
SMARTiSM01272. LsmAD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TGG2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSYDSGIGL PRGQTTGKGP PQSPVFEGVY NNSRMLHFLT AVVGSTCDVK
60 70 80 90 100
VKNGTTYEGI FKTLSSKFEL AVDAVHRKAS EPAGGPRRED IVDTMVFKPS
110 120 130 140 150
DVLLVHFRNV DFNYATKDKF TDSAIAMNSK VNGEHKEKVL QRWEGGDSNS
160 170 180 190 200
DDYDLESDMS NGWDPNEMFK FNEENYGVKT TYDSSLSSYT VPLEKDNSEE
210 220 230 240 250
FRQRELRAAQ LAREIESSPQ YRLRIAMEND DGRTEEEKHS AVQRQGSGRE
260 270 280 290 300
SPSLVSREGK YIPLPQRVRE GPRGGVRCSS SRGGRPGLSS LPPRGPHHLD
310 320 330 340 350
NSSPGPGSEA RGINGGPSRM SPKAQRPLRG AKTLSSPSNR PSGEASVPPT
360 370 380 390 400
SAALPFLPVG RMYPPRSPKS AAPAPVSASC PEPPIGSAVA SSASIPVTSS
410 420 430 440 450
VVDPGAGSIS PASPKLSLTP TDVKELPTKE PSRNLEAQEL ARIAGKVPGL
460 470 480 490 500
QNEQKRFQLE ELRKFGAQFK LQPSSSPETG LDPFPSRILK EEAKGKEKEV
510 520 530 540 550
DGLLTSDPMG SPVSSKTESI LDKEDKVPMA GVGGTEGPEQ LPAPCPSQTG
560 570 580 590 600
SPPVGLIKGD EKEEGPVTEQ VKKSTLNPNA KEFNPTKPLL SVNKSTSTPT
610 620 630 640 650
SPGPRTHSTP SIPVLTAGQS GLYSPQYISY IPQIHMGPAV QAPQMYPYPV
660 670 680 690 700
SNSVPGQQGK YRGAKGSLPP QRSDQHQPAS APPMMQAAAA AAGPPLVAAT
710 720 730 740 750
PYSSYIPYNP QQFPGQPAMM QPMAHYPSQP VFAPMLQSNP RMLTSGSHPQ
760 770 780 790 800
AIVSSSTPQY PAAEQPTPQA LYATVHQSYP HHATQLHGHQ PQPATTPTGS
810 820 830 840 850
QPQSQHAAPS PVQHQAGQAP HLGSGQPQQN LYHPGALTGT PPSLPPGPSA
860 870 880 890 900
QSPQSSFPQP AAVYAIHPHQ QLPHGFTNMA HVTQAHVQTG VTAAPPPHPG
910 920 930 940 950
APHPPQVMLL HPPQGHGGPP QGAVPPSGVP ALSASTPSPY PYIGHPQGEQ
960 970 980 990
PGQAPGFPGG ADDRIREFSL AGGIWHGRAE GLQVGQDARV LGGD
Length:994
Mass (Da):105,446
Last modified:October 11, 2005 - v1
Checksum:iC567C73AE8F08C28
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.
AK168745 mRNA. Translation: BAE40586.1.
RefSeqiXP_006507789.1. XM_006507726.1.
UniGeneiMm.231450.

Genome annotation databases

EnsembliENSMUST00000167759; ENSMUSP00000132959; ENSMUSG00000032637.
GeneIDi233871.
UCSCiuc009jrt.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.
AK168745 mRNA. Translation: BAE40586.1.
RefSeqiXP_006507789.1. XM_006507726.1.
UniGeneiMm.231450.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035415.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000167759; ENSMUSP00000132959; ENSMUSG00000032637.
GeneIDi233871.
UCSCiuc009jrt.1. mouse.

Organism-specific databases

CTDi11273.
MGIiMGI:2446242. Atxn2l.

Phylogenomic databases

eggNOGiKOG2375. Eukaryota.
COG5180. LUCA.
GeneTreeiENSGT00530000063565.
HOVERGENiHBG050623.

Miscellaneous databases

ChiTaRSiAtxn2l. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032637.

Family and domain databases

InterProiIPR009818. Ataxin-2_C.
IPR009604. LsmAD_domain.
IPR025852. SM_dom_ATX.
[Graphical view]
PfamiPF06741. LsmAD. 1 hit.
PF07145. PAM2. 1 hit.
PF14438. SM-ATX. 1 hit.
[Graphical view]
SMARTiSM01272. LsmAD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TGG2_MOUSE
AccessioniPrimary (citable) accession number: Q3TGG2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.