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Protein

Protein FAM107B

Gene

Fam107b

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • sensory perception of sound Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM107B
Gene namesi
Name:Fam107b
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1913790. Fam107b.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002307752 – 131Protein FAM107BAdd BLAST130

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei50N6-acetyllysineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ3TGF2.
MaxQBiQ3TGF2.
PaxDbiQ3TGF2.
PRIDEiQ3TGF2.

PTM databases

iPTMnetiQ3TGF2.
PhosphoSitePlusiQ3TGF2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000026655.
ExpressionAtlasiQ3TGF2. baseline and differential.
GenevisibleiQ3TGF2. MM.

Interactioni

Protein-protein interaction databases

BioGridi211545. 5 interactors.
IntActiQ3TGF2. 5 interactors.
STRINGi10090.ENSMUSP00000027965.

Structurei

3D structure databases

ProteinModelPortaliQ3TGF2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili61 – 112Sequence analysisAdd BLAST52

Sequence similaritiesi

Belongs to the FAM107 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IVZ4. Eukaryota.
ENOG4111QFW. LUCA.
GeneTreeiENSGT00390000011228.
HOGENOMiHOG000048230.
HOVERGENiHBG002824.
InParanoidiQ3TGF2.
PhylomeDBiQ3TGF2.
TreeFamiTF325943.

Family and domain databases

InterProiIPR009533. DUF1151.
[Graphical view]
PANTHERiPTHR16768. PTHR16768. 1 hit.
PfamiPF06625. DUF1151. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3TGF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPDYIEDD NPELIRPQKL INPVKSSRNH QDLHRELLMN QKRGLAPQNK
60 70 80 90 100
PELQKVMEKR RRDQVIKQKE EEAQKKKSDL EIELLKRQQK LEQLELEKQK
110 120 130
LQEEQENAPE FVKVKGNLRR TGQEVAQAQE S
Length:131
Mass (Da):15,572
Last modified:April 4, 2006 - v2
Checksum:i13A5FE0FB42D0343
GO

Sequence cautioni

The sequence BAE40596 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK032875 mRNA. Translation: BAC28065.1.
AK013932 mRNA. Translation: BAB29065.1.
AK019815 mRNA. Translation: BAB31861.1.
AK168759 mRNA. Translation: BAE40596.1. Different initiation.
AL844530 Genomic DNA. Translation: CAM18586.1.
CH466542 Genomic DNA. Translation: EDL07938.1.
BC021353 mRNA. Translation: AAH21353.1.
CCDSiCCDS15655.1.
RefSeqiNP_079902.1. NM_025626.4.
UniGeneiMm.277864.

Genome annotation databases

EnsembliENSMUST00000027965; ENSMUSP00000027965; ENSMUSG00000026655.
ENSMUST00000115053; ENSMUSP00000110705; ENSMUSG00000026655.
ENSMUST00000115054; ENSMUSP00000110706; ENSMUSG00000026655.
ENSMUST00000115055; ENSMUSP00000110707; ENSMUSG00000026655.
GeneIDi66540.
KEGGimmu:66540.
UCSCiuc008iek.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK032875 mRNA. Translation: BAC28065.1.
AK013932 mRNA. Translation: BAB29065.1.
AK019815 mRNA. Translation: BAB31861.1.
AK168759 mRNA. Translation: BAE40596.1. Different initiation.
AL844530 Genomic DNA. Translation: CAM18586.1.
CH466542 Genomic DNA. Translation: EDL07938.1.
BC021353 mRNA. Translation: AAH21353.1.
CCDSiCCDS15655.1.
RefSeqiNP_079902.1. NM_025626.4.
UniGeneiMm.277864.

3D structure databases

ProteinModelPortaliQ3TGF2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi211545. 5 interactors.
IntActiQ3TGF2. 5 interactors.
STRINGi10090.ENSMUSP00000027965.

PTM databases

iPTMnetiQ3TGF2.
PhosphoSitePlusiQ3TGF2.

Proteomic databases

EPDiQ3TGF2.
MaxQBiQ3TGF2.
PaxDbiQ3TGF2.
PRIDEiQ3TGF2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000027965; ENSMUSP00000027965; ENSMUSG00000026655.
ENSMUST00000115053; ENSMUSP00000110705; ENSMUSG00000026655.
ENSMUST00000115054; ENSMUSP00000110706; ENSMUSG00000026655.
ENSMUST00000115055; ENSMUSP00000110707; ENSMUSG00000026655.
GeneIDi66540.
KEGGimmu:66540.
UCSCiuc008iek.1. mouse.

Organism-specific databases

CTDi83641.
MGIiMGI:1913790. Fam107b.

Phylogenomic databases

eggNOGiENOG410IVZ4. Eukaryota.
ENOG4111QFW. LUCA.
GeneTreeiENSGT00390000011228.
HOGENOMiHOG000048230.
HOVERGENiHBG002824.
InParanoidiQ3TGF2.
PhylomeDBiQ3TGF2.
TreeFamiTF325943.

Miscellaneous databases

ChiTaRSiFam107b. mouse.
PROiQ3TGF2.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000026655.
ExpressionAtlasiQ3TGF2. baseline and differential.
GenevisibleiQ3TGF2. MM.

Family and domain databases

InterProiIPR009533. DUF1151.
[Graphical view]
PANTHERiPTHR16768. PTHR16768. 1 hit.
PfamiPF06625. DUF1151. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF107B_MOUSE
AccessioniPrimary (citable) accession number: Q3TGF2
Secondary accession number(s): Q9CR82
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: November 2, 2016
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.