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Protein

Protein FAM107B

Gene

Fam107b

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • sensory perception of sound Source: MGI

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM107B
Gene namesi
Name:Fam107b
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1913790. Fam107b.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002307752 – 131Protein FAM107BAdd BLAST130

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei50N6-acetyllysineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ3TGF2.
MaxQBiQ3TGF2.
PaxDbiQ3TGF2.
PRIDEiQ3TGF2.

PTM databases

iPTMnetiQ3TGF2.
PhosphoSitePlusiQ3TGF2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000026655.
ExpressionAtlasiQ3TGF2. baseline and differential.
GenevisibleiQ3TGF2. MM.

Interactioni

Protein-protein interaction databases

BioGridi211545. 5 interactors.
IntActiQ3TGF2. 6 interactors.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili61 – 112Sequence analysisAdd BLAST52

Sequence similaritiesi

Belongs to the FAM107 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IVZ4. Eukaryota.
ENOG4111QFW. LUCA.
GeneTreeiENSGT00390000011228.
HOGENOMiHOG000048230.
HOVERGENiHBG002824.
InParanoidiQ3TGF2.
PhylomeDBiQ3TGF2.
TreeFamiTF325943.

Family and domain databases

InterProiView protein in InterPro
IPR009533. DUF1151.
PANTHERiPTHR16768. PTHR16768. 1 hit.
PfamiView protein in Pfam
PF06625. DUF1151. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3TGF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPDYIEDD NPELIRPQKL INPVKSSRNH QDLHRELLMN QKRGLAPQNK
60 70 80 90 100
PELQKVMEKR RRDQVIKQKE EEAQKKKSDL EIELLKRQQK LEQLELEKQK
110 120 130
LQEEQENAPE FVKVKGNLRR TGQEVAQAQE S
Length:131
Mass (Da):15,572
Last modified:April 4, 2006 - v2
Checksum:i13A5FE0FB42D0343
GO

Sequence cautioni

The sequence BAE40596 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK032875 mRNA. Translation: BAC28065.1.
AK013932 mRNA. Translation: BAB29065.1.
AK019815 mRNA. Translation: BAB31861.1.
AK168759 mRNA. Translation: BAE40596.1. Different initiation.
AL844530 Genomic DNA. Translation: CAM18586.1.
CH466542 Genomic DNA. Translation: EDL07938.1.
BC021353 mRNA. Translation: AAH21353.1.
CCDSiCCDS15655.1.
RefSeqiNP_079902.1. NM_025626.4.
UniGeneiMm.277864.

Genome annotation databases

EnsembliENSMUST00000027965; ENSMUSP00000027965; ENSMUSG00000026655.
ENSMUST00000115053; ENSMUSP00000110705; ENSMUSG00000026655.
ENSMUST00000115054; ENSMUSP00000110706; ENSMUSG00000026655.
ENSMUST00000115055; ENSMUSP00000110707; ENSMUSG00000026655.
GeneIDi66540.
KEGGimmu:66540.
UCSCiuc008iek.1. mouse.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF107B_MOUSE
AccessioniPrimary (citable) accession number: Q3TGF2
Secondary accession number(s): Q9CR82
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: July 5, 2017
This is version 78 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families